Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0043 ATGGTTCTTCTACAGCTAGATCCGTTTCTCAATGAGCTTACCAGCATGTTTGAGCGCAGCACTGAGAAGGGCTCTGTTTGGGTTACTCTTAAACGATCATCTTTGAAATCTAAGGTGCAGAGGAATAAATTGGCCACTGCTGGTGAAGCAATTGAGTATAGATGCCTTATACGTGCCACTGATGGGAAAAAGACAATTTCTACTTCTGTATGTGTCTAA 219 0.4201 MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRATDGKKTISTSVCV 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0043 72 PANTHER - 2 70 - -
Aed5g0043 72 Gene3D Signal recognition particle alu RNA binding heterodimer, srp9/1 1 71 IPR009018 GO:0006614|GO:0008312|GO:0048500
Aed5g0043 72 PANTHER SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN 2 70 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
Aed5g0043 72 Pfam Signal recognition particle 14kD protein 4 70 IPR003210 GO:0005786|GO:0006614|GO:0008312|GO:0030942
Aed5g0043 72 SUPERFAMILY Signal recognition particle alu RNA binding heterodimer, SRP9/14 1 70 IPR009018 GO:0006614|GO:0008312|GO:0048500
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0043 Aed-Chr5 348794 349536 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0043 K03104 - jre:108982787 134.806