Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0039 ATGGATAGAACTGTTGATGCCGATATTGTGATCGTGGGAGGTGGTATTTGTGGCCTTGCAACAGCCCTTGCTCTCCACAGGAAGAAAATTAAAAGTCTGGTATTAGAAAGATCAGAGAATTTGCGAGCTACAGGAGCAGCTATAATAGTGCAGGCAAATGGCTGGCGTGTACTTGATCAGCTTGGCATTGGCTCAACACTTAGACAAACTGCTATTCAAATTCAAGGGGGAAGATTCATATCTCTGAATGAGGCTGAGCCAATGGAATTTCCATTTGGGGTAAATTCGGAGTTTCGGTGTTTAAAGCGTAGTGATTTGATGAAAGCGATGGCGGATGATTTACCGGTGGGGACTATACGTACGAACTGTGAAGTGGTTTCGGTTGAATTAGATCCTTTAACAAACTCGCCTCAACTTATGCTTAGCACTGGAGGTGTTATACAAGCAAAGGTTGTGATTGGGTGTGATGGCGTTAACTCTGCGATTGCAAGTATGTTTGGGTTACATCAAACGAAGCTGTTGGTCTTCTCTACATGTGTTGCACGAGGCTTCACCAATTATCCAGATGGTCATCAATTTCCCAGTGAGTTTGTTGTGATGAGCAGAGGTCAAGTCCAACTCGGAAGAATTCCTGTGTCTGACAACCTCGTTTATTGGTTTGTAACAAGGCCAAGGACGTCTAAAGATTCTTCCATTTTTAAAGAGCCAGCTCTTATTAGACAATCATTACTAGAATCAATGAAAGGTTTCACAGAAGGGGCGGTGGAGATGATAGGAAGTTGCAAGTTGAGCTACTTGCATCTGACAGAGTTGAAGTATCGGGCACCGTGGGACTTGGTGATGAACAAATTCAGGAAAAGTACAGTAACAATTGCTGGTGACGCAATGCATGCCACAGGGCCATTCATTGCACAGGGTGGCGCAGCCTCCATGGAAGATGCCCTAGTTCTCGCTAGATGCCTCTCACAATCACTAAATAAAGCAGAGGAAGCATTTGATCGATATGTCAAAGAAAGGAAGCTCAGAAACTTTTGGCTCTCTTTGCATTCTTTCCTTGTTGGGAAGAAGCTTGACACTAAGTCATCCATACTCAGATTCATTATCATTGCAATCATGGCACTTCTCTTTAGAGACCCTGATTGGCATTCCCGCTATTATTGTGGAATTCTTTAG 1173 0.4356 MDRTVDADIVIVGGGICGLATALALHRKKIKSLVLERSENLRATGAAIIVQANGWRVLDQLGIGSTLRQTAIQIQGGRFISLNEAEPMEFPFGVNSEFRCLKRSDLMKAMADDLPVGTIRTNCEVVSVELDPLTNSPQLMLSTGGVIQAKVVIGCDGVNSAIASMFGLHQTKLLVFSTCVARGFTNYPDGHQFPSEFVVMSRGQVQLGRIPVSDNLVYWFVTRPRTSKDSSIFKEPALIRQSLLESMKGFTEGAVEMIGSCKLSYLHLTELKYRAPWDLVMNKFRKSTVTIAGDAMHATGPFIAQGGAASMEDALVLARCLSQSLNKAEEAFDRYVKERKLRNFWLSLHSFLVGKKLDTKSSILRFIIIAIMALLFRDPDWHSRYYCGIL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0039 390 Pfam FAD binding domain 7 341 IPR002938 GO:0071949
Aed5g0039 390 Gene3D - 8 362 IPR036188 -
Aed5g0039 390 SUPERFAMILY FAD/NAD(P)-binding domain 7 379 IPR036188 -
Aed5g0039 390 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 389 IPR044560 -
Aed5g0039 390 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 389 - -
Aed5g0039 390 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 - -
Aed5g0039 390 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Aed5g0039 390 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 - -
Aed5g0039 390 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Aed5g0039 390 Coils Coil 318 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0039 Aed-Chr5 318888 321721 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0039 1 354 Miscellaneous Gene Families AT5G05320 34.853 8.58e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0039 - - gmx:100805243 690.649