Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0022 ATGGCAACGAACAGGAATGTGATGAAGGCGGTTCAGTACGATGAATGTGGGGGAGGTCCCGTTGGCTTGAAGCACGTTGGAGTTAGCGTTCTCAGTCCAAAGGCAAAAGAGGTTTTACTGAAAGTGGAGGCAATTAGCATTAACCCCGTCGATTGGAAGATTCAGAAGGGGCTTCTCCGTCCTATATTTTACCCTGGAAGCTTTCCCCACACACCTTGCACCGATGTCGCAGGAGAGGTAGTTGAGATCGGAGCACAAGTCAAAGATTTCAAAGTTGGTGACAAAGTCGTTGCTAAACTCAATTCTCGATATGGAGGTGGACTGGCTGAGTTTGCTGTGGCCAGTGAGAGCTTAACAGCTGGCAGACCATCTGAAGTCTCAGCCGCTGAAGCTGCGGCATTACCTATTGCCGGTCTGACGGCTCGTGATGCCCTTGCTCTAATTGCAGGAATCAAGCTAGATAGCACCGGACTAACTGCTGCTTCAGGTGGTGTTGGTCACTACGCTGTTCAATTGGCAAAACTAGGAGCTCACAACATTGACTTTGTTAAGGCCTTAGGCGCCGATGAGGTTCTTGACTACAGGACTCCAGAGGGTGCGCTCTCGAGTCCATCTGGAAGGAAATATGATGCAGTTATCAATTGTACTACTGGAATACCATGGTTAACTTTTGATCCTAATTTGACTCAAAAGGCCGTCGTGGTTGATTTAACACCAAATCCAACTTCATTGATCACTACTGCCCTCAAGAAACTTACTTTTTCCAAAAAGAAGCTGCTTCCACTTTTTGTTGATGTCAAGCGTGAGGGCCTGGAATATCTTGTTCAATTACTGAAGGATGGGAAGCTCAAGTCTGTTATTGACTCCAAGTTTCCTTTGAAAATATATTTAACCCTTTTATTTTTAGTATCTAATCATTTTTTTTTTACCAATCTTAGTATTTTAACTATTTATTTGTTAACATTTTTTCTTGTATTTAGTGGCAAGTATATCACTTTAAAGTGA 1005 0.4338 MATNRNVMKAVQYDECGGGPVGLKHVGVSVLSPKAKEVLLKVEAISINPVDWKIQKGLLRPIFYPGSFPHTPCTDVAGEVVEIGAQVKDFKVGDKVVAKLNSRYGGGLAEFAVASESLTAGRPSEVSAAEAAALPIAGLTARDALALIAGIKLDSTGLTAASGGVGHYAVQLAKLGAHNIDFVKALGADEVLDYRTPEGALSSPSGRKYDAVINCTTGIPWLTFDPNLTQKAVVVDLTPNPTSLITTALKKLTFSKKKLLPLFVDVKREGLEYLVQLLKDGKLKSVIDSKFPLKIYLTLLFLVSNHFFFTNLSILTIYLLTFFLVFSGKYITLK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0022 334 Pfam Zinc-binding dehydrogenase 186 294 - -
Aed5g0022 334 CDD MDR1 11 293 - -
Aed5g0022 334 Pfam Alcohol dehydrogenase GroES-like domain 36 102 IPR013154 -
Aed5g0022 334 SUPERFAMILY GroES-like 7 150 IPR011032 -
Aed5g0022 334 PANTHER ZINC-BINDING DEHYDROGENASE FAMILY OXIDOREDUCTASE 6 294 - -
Aed5g0022 334 SMART PKS_ER_names_mod 18 287 IPR020843 GO:0016491
Aed5g0022 334 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 6 294 - -
Aed5g0022 334 Gene3D - 16 294 - -
Aed5g0022 334 Gene3D - 145 267 - -
Aed5g0022 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 126 289 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0022 Aed-Chr5 201541 202773 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0022 K00224 - gmx:100790762 436.417