Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0017 ATGGCGTTAATAGTTGGGTTCGAAGAAGGGCTTGAGCCGGTGGCGGTTCATGTTGCTTCTGCTGTTGACTACAGAGGTCGAGCAGCGATCAGATCCAAATCTGGGTCGTGGAGATCCGCTTCCTTTATCATAGGAGTGGAAGTGGCAGAGAGGATTGCATATTATGGGATTCAGGGGAACCTTATATCTTACCTCACCGGCCCACTCCATCAGACTACGGCCACCGCCGCCCAGAATGTCAATGTCTGGTCGGGAACTGCTTCCTTGCTTCCTCTCTTTGGGGCTTTTCTTGCTGATTCTCTTCTCGGCCGCTACCGCACTATAATACTCTCTTCCTTCATCTATATTCTGGGACTAGGATTGTTAACACTATCGGCTATGCTTCCTTCTCTCACCAATTCTGAGTGCCAAGTCGGCAATGAATTCAAATCATGCTCTTCTCAGTCACAAATAATTTTGTTCTTTATCTCTCTTTATTTGGTTGCCATTGGGCAAGGTGGACATAAGCCCTGTGTTCAGGCTTTTGGAGCAGATCAATTCGATGAACAACATCCAAAGGAGTACAAAGACAGAGGCTCATTCTTTAATTGGTGGTATTTTACTATGTGTGCAGGTTGCATGGCAACTATTTCGATCTTGAACTATATACAGGACAACCTTAGTTGGGTCCTTGGATTTGGAATTCCTTGTGTTGTCATGATTATTGCATTGCTTGTTTTCTTGCTCGGAACAATGACCTACAGGTTTAACATTCAGCAGCATGACAAAAGCCCCTTTATCAGAATTGGCCGCGTATTTGTTGCTGCTATAAGAAATTGGCAATCCCCCCTATCAAGCACAGCTGTCAAAGCAGAACATGATCAAAGTTCTGAACAATTCAAGTTCCTCAACAAAGCATTGTTAGCGCCAGAGGATTCTATAGAAGAAGAGGAGAGCTGTAGCCTTAGTGAGGTGGAAGAAGCAAAAGCAGTATTGAGGCTGGTTCCTATTTGGGCTTCAACTCTGGTTTATGCTGTGGTGTTTGCTCAAGTTCCTACGTTCTTTACAAAGCAAGGGGTTACTATGGAGAGAACAATATTTTCCGGCTTTGAAATACCCGCTGCTTCTCTTCAAACGCTTGTCACTGTGGGCATTGTTCTCTTCAGTCCCATCTATGACCGTCTATTTGTGCCAATGGCAAGAGCTATTACTGGCAAACCCTCAGGCATCACAATGCTACAAAGAATTGGGACTGGAATTTCTATATCCATATTTACGATAGTATTTGCGGCCCTTGTTGAGATGAAAAGATTGAAAACAGCTCAAGAGTCTGGTGTTGTTGATGAACCTAATACAACTGTTCCAATGAGTATATGGTGGTTGATTCCCCAATATTTCTTGTTCGGAGTCTCTGAAGTTTTTACCATGGTTGGTCTGCAGGAATTTTTCTATGACCAGGTCCCAAATGAACTAAGAAGCATGGGTCTTGCTCTCTACTTGAGCATCTTTGGTGTTGGGAGCTTTATAAGTGGCTTTCTCATTTCTGTGATAGAGAAAGTGACTGGCAAAGATGGACAAGACAGTTGGTTTGCTAATAATCTGAATAAGGCGCATGTTGATTACTTTTACTGGCTACTTGCTGGACTCAGTTTAATGGGATTCGCTTTGTTCATTTGCTTTGCTAAATCTTACATTTATAATCACAAAGGAATCAGACGGGAATAG 1704 0.4313 MALIVGFEEGLEPVAVHVASAVDYRGRAAIRSKSGSWRSASFIIGVEVAERIAYYGIQGNLISYLTGPLHQTTATAAQNVNVWSGTASLLPLFGAFLADSLLGRYRTIILSSFIYILGLGLLTLSAMLPSLTNSECQVGNEFKSCSSQSQIILFFISLYLVAIGQGGHKPCVQAFGADQFDEQHPKEYKDRGSFFNWWYFTMCAGCMATISILNYIQDNLSWVLGFGIPCVVMIIALLVFLLGTMTYRFNIQQHDKSPFIRIGRVFVAAIRNWQSPLSSTAVKAEHDQSSEQFKFLNKALLAPEDSIEEEESCSLSEVEEAKAVLRLVPIWASTLVYAVVFAQVPTFFTKQGVTMERTIFSGFEIPAASLQTLVTVGIVLFSPIYDRLFVPMARAITGKPSGITMLQRIGTGISISIFTIVFAALVEMKRLKTAQESGVVDEPNTTVPMSIWWLIPQYFLFGVSEVFTMVGLQEFFYDQVPNELRSMGLALYLSIFGVGSFISGFLISVIEKVTGKDGQDSWFANNLNKAHVDYFYWLLAGLSLMGFALFICFAKSYIYNHKGIRRE 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0017 567 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 94 118 IPR018456 GO:0006857|GO:0016020|GO:0022857
Aed5g0017 567 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 21 563 - -
Aed5g0017 567 Pfam POT family 105 522 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed5g0017 567 CDD MFS_NPF5 37 559 IPR044739 GO:0042937|GO:0042938|GO:0071916
Aed5g0017 567 Gene3D MFS general substrate transporter like domains 13 565 IPR036259 -
Aed5g0017 567 SUPERFAMILY MFS general substrate transporter 54 555 IPR036259 -
Aed5g0017 567 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 563 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0017 Aed-Chr5 169416 172334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0017 18 558 Organic Solute Cotransporters AT1G22540 64.599 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0017 K14638 - gmx:100776720 968.378