Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0014 ATGATGAACAAGCTTGTGGTAGAAGTTGTGGAGGCGAGCGACCTGATGCCCAAAGATGGGGAAGGGTCGGCTAGCCCCTTTGTGGAAGTGAAGTTTGATGAGCAGCAGCACAGCACTGAAACCAAGCACAAAGACCTGAATCCTACTTGGAACCACAGGTTTGTTTTCAACATCAATAACCCCAGAGATCTTCCTCACAAGACTATCGAAGTGGTTGTTTACAATCACAACGATCGGAACAACAATAACAACTTCCTTGGAAGGGTCAGACTTTCAGGCGCTTCTATCCCTCTCTCAGAGTCCCAGGCCACTGTGGTACGCTACCCACTTGAGAAACGCGGTCTCTTCTCAAGCATCAGAGGAGATATTGCTCTAAGATGTTATGCGCTCTATGATCAAGTACACACTCCTGAGGAGGAGGAGGAGGAGGAGGAGTATCAGTATCAGAACACTCCTCCTCCCTTGCAAGAAATAAACCCCAACATGGTTGAAGAAAGCAGCGTGGGCGTGGCTGGTGACAATAATAATAATAAGAAGAAGATGAAGATGAAAAAGAAAGAAAAGGAAGTCAGGACTTTTCACTCTATTCCAGCTGCCGCACCCAAAGCAGCGGCACCGGCACCGGCAGTAGTTGAAACTCTAAGGAGGGTTGATTTTGCAAAAGTTGGGCCACCCAATGCAATGTTAATGCAGCAGATCCCGAGGCAAAACCCAGAGTATTTATTGGTTGAGACAAGTCCACCGCTGGCGGCTCGTCTGCGCTACAGAGGAGGAGGGGACAAGATATCGACCACCTACGACTTGGTGGAACAGATGCATTACTTGTACGTCAATGTGGTCAAGGCCAGGGATCTCCCTGTCATGGATATCACCGGAAGCCTCGACCCTTACGTGGAAGTCAAGCTCGGTAACTACAAAGGCCTTACCAAGCACCTGGATAAGAATCAGAATCCTGTTTGGAAGCAAATCTTCGCCTTCTCCAAGGACAGGTTGCAATCCAATTTGCTTGAAGTCACCGTCAAGGATAAGGACATTGGCAAAGATGATTTTGTGGGGAAAGTGTTGTTTGATCTCACTGAGATTCCTCTTCGTGTACCCCCAGATAGCCCCTTGGCTCCTCAATGGTACAGATTGGAGGACAAGAAGGGCTATAAAATTCATAATAATGGGGAAATCATGCTTGCTGTTTGGATGGGAACACAGGCCGATGAGTCCTTCCCGGAGGCCTGGCACTCTGATGCTCATAACGTCGCTCACTCCAACCTTGCAAACACCCGCTCAAAGGTTTATTTCTCCCCAAAGCTTTACTATCTTAGAGTACAAGTCATTGAGGCTCAGGATCTTGTTCCTTCCGATAAAGGAAGGGGCCCCCCAGACGCCGTTGTTAGAGTACAGCTAGGGAATCAGATGAGATTCACCAGATCTTCTCAGATGAGAAGCATCAACCCAGTTTGGAATGATGAGCTTATGTTTGTGGCCGCCGAGCCCTTTGAGGATTTTATCATTGTCACTGTTGAGGACAAACTAGGTGGTGGTCCTAATGTTGAAATCTTAGGAAGGGAGATCATATCTGTCAGAAGCGTTCCGCCCAGACACGAGTCTAGCAAGAAGCTCCCGGATTCTCGTTGGTTCAATTTGCCCAGGCCTAGTGCTGTTGGTGAGGAAGAGACAGAGAAAAAAAAGGACAAGTTCTCAAGCAAGATTCACCTCCGAGTGTGTCTTGAGGCCGGTTACCATGTGCTTGATGAGTCCACCCATTTCAGCAGTGATCTTCAGCCATCCTCCAAACATTTGAGGAAGAAAAACATTGGAATTCTGGAACTTGGGATATTGAGTGCCCGCAATTTGCTACCCATGAAGGCCAGGGAAGGGAGGAGTACAGGTGCATACTGCGTGGCCAAGTATGGCAACAAATGGGTTCGAACCAGAACTCTGCTTGATACACTCTCCCCTCGATGGAATGAGCAATATACCTGGGAGGTTCATGATCCCTGCACTGTGATCACAGTTGGGGTTTTTGACAACCACCACATCAATGGGAGCAGCGATGGCAGAGATCAGAGAATTGGAAAGGTAAGAATCAGGCTTTCAACTCTGGAAACTGATAGGGTGTATACTCATTTTTATCCTCTGCTGGTTCTCCAACCCGATGGACTGAAGAAGAATGGAGAGCTTCACTTGGCAGTGAGATTCACTTGCACAGCATGGGTTAATATGGTGACCCAGTACGGTAGGCCTTTGCTTCCAAAAATGCACTATGTCCAGCCCATACCGGTGAGGCACATAGATTGGCTACGCCACCAGGCCATGCAGATTGTGGCGGCTCGGCTGTCTAGAGCTGAGCCACCCCTAAGGCGTGAAGCAGTTGAGTACATGCTTGACGTGGATTACCACATGTGGAGTCTAAGGAGAAGCAAGGCCAATTTTCTTCGCATAATGTCACTACTCAAAGGAGTTACGACTGTTTGCAAATGGTTTGATGACATCTGCACTTGGAGAAACCCAGTGACGACCTGTCTTGTTCACGTCTTGTTCTTCATACTCGTTTGCTACCCGGAATTGATATTACCCACCATTTTCCTCTACTTGTTTGTCATTGGGATTTGGAATTACCGGTTCAGGCCAAGGCAGCCACCCCACATGGATGCCAGGCTTTCACAAGCAGAAACTGCTCACCCGGATGAACTAGACGAGGAATTTGACACTTTTCCAACAACTAAACCTTCAGATATTGTCAGAATGAGGTATGACAGATTGCGGAGTGTGGCCGGTAGAGTCCAGACCGTGGTTGGAGATTTGGCTACTCAAGGAGAAAGAGCTCAAGCCATACTAGGCTGGAGAGACTCCAGGGCTACATCTATCTTCATCATCTTCTCACTAATTTGGGCTGTTTTCATTTACATTACTCCCTTCCAAGTCGTTGCAATTCTACTTGGCCTCTATATGCTACGTCACCCTCGCTTTAGGAGCAAGATGCCATCTGTACCAGTTAATTTCTTCAAGAGATTGCCTTCCAAATCAGATATGCTCATTTGA 3036 0.4766 MMNKLVVEVVEASDLMPKDGEGSASPFVEVKFDEQQHSTETKHKDLNPTWNHRFVFNINNPRDLPHKTIEVVVYNHNDRNNNNNFLGRVRLSGASIPLSESQATVVRYPLEKRGLFSSIRGDIALRCYALYDQVHTPEEEEEEEEYQYQNTPPPLQEINPNMVEESSVGVAGDNNNNKKKMKMKKKEKEVRTFHSIPAAAPKAAAPAPAVVETLRRVDFAKVGPPNAMLMQQIPRQNPEYLLVETSPPLAARLRYRGGGDKISTTYDLVEQMHYLYVNVVKARDLPVMDITGSLDPYVEVKLGNYKGLTKHLDKNQNPVWKQIFAFSKDRLQSNLLEVTVKDKDIGKDDFVGKVLFDLTEIPLRVPPDSPLAPQWYRLEDKKGYKIHNNGEIMLAVWMGTQADESFPEAWHSDAHNVAHSNLANTRSKVYFSPKLYYLRVQVIEAQDLVPSDKGRGPPDAVVRVQLGNQMRFTRSSQMRSINPVWNDELMFVAAEPFEDFIIVTVEDKLGGGPNVEILGREIISVRSVPPRHESSKKLPDSRWFNLPRPSAVGEEETEKKKDKFSSKIHLRVCLEAGYHVLDESTHFSSDLQPSSKHLRKKNIGILELGILSARNLLPMKAREGRSTGAYCVAKYGNKWVRTRTLLDTLSPRWNEQYTWEVHDPCTVITVGVFDNHHINGSSDGRDQRIGKVRIRLSTLETDRVYTHFYPLLVLQPDGLKKNGELHLAVRFTCTAWVNMVTQYGRPLLPKMHYVQPIPVRHIDWLRHQAMQIVAARLSRAEPPLRREAVEYMLDVDYHMWSLRRSKANFLRIMSLLKGVTTVCKWFDDICTWRNPVTTCLVHVLFFILVCYPELILPTIFLYLFVIGIWNYRFRPRQPPHMDARLSQAETAHPDELDEEFDTFPTTKPSDIVRMRYDRLRSVAGRVQTVVGDLATQGERAQAILGWRDSRATSIFIIFSLIWAVFIYITPFQVVAILLGLYMLRHPRFRSKMPSVPVNFFKRLPSKSDMLI 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0014 1011 SMART C2_3c 437 537 IPR000008 -
Aed5g0014 1011 SMART C2_3c 4 110 IPR000008 -
Aed5g0014 1011 SMART C2_3c 605 708 IPR000008 -
Aed5g0014 1011 SMART C2_3c 274 370 IPR000008 -
Aed5g0014 1011 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1011 - -
Aed5g0014 1011 Pfam Plant phosphoribosyltransferase C-terminal 856 1010 IPR013583 -
Aed5g0014 1011 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 436 595 IPR035892 -
Aed5g0014 1011 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 148 IPR035892 -
Aed5g0014 1011 PANTHER BNAA09G30540D PROTEIN 2 1011 - -
Aed5g0014 1011 Pfam C2 domain 4 100 IPR000008 -
Aed5g0014 1011 Pfam C2 domain 437 538 IPR000008 -
Aed5g0014 1011 Pfam C2 domain 274 376 IPR000008 -
Aed5g0014 1011 Pfam C2 domain 604 711 IPR000008 -
Aed5g0014 1011 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 604 737 IPR035892 -
Aed5g0014 1011 ProSiteProfiles C2 domain profile. 256 376 IPR000008 -
Aed5g0014 1011 Gene3D C2 domain 602 735 IPR035892 -
Aed5g0014 1011 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Aed5g0014 1011 MobiDBLite consensus disorder prediction 167 186 - -
Aed5g0014 1011 ProSiteProfiles C2 domain profile. 416 538 IPR000008 -
Aed5g0014 1011 MobiDBLite consensus disorder prediction 138 159 - -
Aed5g0014 1011 CDD C2D_MCTP_PRT_plant 605 728 - -
Aed5g0014 1011 Gene3D C2 domain 2 156 IPR035892 -
Aed5g0014 1011 CDD C2C_MCTP_PRT_plant 437 593 - -
Aed5g0014 1011 ProSiteProfiles C2 domain profile. 587 709 IPR000008 -
Aed5g0014 1011 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 274 414 IPR035892 -
Aed5g0014 1011 Gene3D C2 domain 419 574 IPR035892 -
Aed5g0014 1011 Gene3D C2 domain 261 398 IPR035892 -
Aed5g0014 1011 CDD C2B_MCTP_PRT_plant 274 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0014 Aed-Chr5 156944 159979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0014 2 1011 Lipid Metabolism Gene Families AT1G22610 71.800 0.0 1497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0014 - - gmx:100778133 1805.03