Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0008 ATGGCGATGAGTGAGAGTAACGGGAACAGCAGGAGGCGAAATGTTGAAGATCAAGATCTGGGACTGTACTTTTTGGAGGCTGCGTGTAGGGGTAGGGAGATGAAAGAGGAAGAGGAAGAAGAAGAAGAAGTGGAAGAAGAAGAAGAGGAGGAGGCACCCAAGGAGCTCAACACCATTAACAGCTCTGGTGGTTTCGTTGTGGTGTCCACGGACAAGTTGTCGGTAAAGTACACCAACGTCAACCTTCACGGTCACGACGTCGGTGTGATTCAGGCCAACAAACCTGCTCCTACCAAGCGCCTCATTTACTATTTCGAGATTCATGTCAAGGATGCCGGCGTTAAGGGCCAGATAGCCATTGGCTTCACCTCCGAGACCTTCAAGATGCGAAGACAACCAGGGTGGGAGTCCAATAGCTGCGGCTATCACGGCGATGATGGTCTGCTTTACCGTGGACAAGGCAAGGGAGAAGCGTTTGGCCCTACCTATACATCTGGAGACGTAGTTGGTGCCGGAATTAACTATGCTGCACATGAATTCTTTTTCACTAAAAATGGCCAAGTTGTGGGCTCTGTTTACAAAGACATGAAAGGTCCCCTTTTTCCAACCATTGCTGTTCACAGCCAAAACGAAGAGGTGCATGTCAACTTTGGGCAGAAACCATTTACTTTTGACCTAAAGGAATTTGAATCACAAGAAAGAATGAAGCAGCAACTGAAAATAGAGGAGATTTCTGTGCCAACAAGTGTCAGTTACGGAATTGTCCGCTCCTACCTGCTACACTATGGCTATGAAGATACATTGAATTCATTTGATGTGGCTAGTAAAAGTACTGTTCCTCCTATATACGTAGCTCAAGAAAGTGGAAATGATGAGCAGGAAATAACATATGCCTTAAATCACAGAAAGACTCTACGGCAGCTAATCAGGAATGGGGACATTGATGTTGCATTTGATAAATTGCGTGAATGGTATCCACAGATTGTTGAGGACAATACATCAGCTACATGTTTTCTGCTTCATTGTCAAAAGTTTATCGAATTAGTTCGGGCTGGAGCACTTGAAGAGGCGGATTGTGTTGCTTTGCTGGCATATGAACGGCCTCTGGAATCCTCCGTAGGTTATCTTCTAAAAGACTCGCAGCGGGAAGTTGTAGCTGACATAGTAAATGCCATGATTTTGTCCACAAATCCTAATATGAAAAATTCAAAGCATTGTTTGCACTCCTATCTTGAGAGGTTACTTAGACAGCTTACTGCTTGCTGCTTAGAAAGGCGAGCTCTGAATGGAGAGCAGGGAGAAGCTTTCCAACTTCAGAGAGTGCTTAGCAGTAGTAGAAGAGGCTAG 1347 0.4521 MAMSESNGNSRRRNVEDQDLGLYFLEAACRGREMKEEEEEEEEVEEEEEEEAPKELNTINSSGGFVVVSTDKLSVKYTNVNLHGHDVGVIQANKPAPTKRLIYYFEIHVKDAGVKGQIAIGFTSETFKMRRQPGWESNSCGYHGDDGLLYRGQGKGEAFGPTYTSGDVVGAGINYAAHEFFFTKNGQVVGSVYKDMKGPLFPTIAVHSQNEEVHVNFGQKPFTFDLKEFESQERMKQQLKIEEISVPTSVSYGIVRSYLLHYGYEDTLNSFDVASKSTVPPIYVAQESGNDEQEITYALNHRKTLRQLIRNGDIDVAFDKLREWYPQIVEDNTSATCFLLHCQKFIELVRAGALEEADCVALLAYERPLESSVGYLLKDSQREVVADIVNAMILSTNPNMKNSKHCLHSYLERLLRQLTACCLERRALNGEQGEAFQLQRVLSSSRRG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0008 448 MobiDBLite consensus disorder prediction 32 58 - -
Aed5g0008 448 PANTHER RAN BINDING PROTEIN 9-RELATED 358 445 - -
Aed5g0008 448 PANTHER RAN BINDING PROTEIN 9-RELATED 40 357 - -
Aed5g0008 448 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 298 356 IPR006595 -
Aed5g0008 448 PANTHER RAN-BINDING PROTEIN M HOMOLOG 358 445 - -
Aed5g0008 448 PANTHER RAN-BINDING PROTEIN M HOMOLOG 40 357 - -
Aed5g0008 448 CDD SPRY_RanBP_like 88 218 IPR044736 -
Aed5g0008 448 SUPERFAMILY Concanavalin A-like lectins/glucanases 60 224 IPR013320 -
Aed5g0008 448 ProSiteProfiles B30.2/SPRY domain profile. 34 222 IPR001870 -
Aed5g0008 448 SMART ctlh 298 356 IPR006595 -
Aed5g0008 448 Coils Coil 27 52 - -
Aed5g0008 448 MobiDBLite consensus disorder prediction 36 53 - -
Aed5g0008 448 Pfam CTLH/CRA C-terminal to LisH motif domain 300 355 IPR024964 -
Aed5g0008 448 SMART SPRY_3 100 221 IPR003877 GO:0005515
Aed5g0008 448 SMART toby_final6 333 431 IPR013144 -
Aed5g0008 448 Gene3D - 29 238 IPR043136 -
Aed5g0008 448 Pfam SPRY domain 102 219 IPR003877 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0008 K23334 - gmx:100805319 802.357