Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0007 ATGGCTTTTTGGGGAGTAGAAATAAAGCCGGGAAAGCCTTTTACTCATAAATATGACGACTCCAAAGGACGCCTTCATATTTCAATGGCCACTTTGGGGTTGGGCACTGCAACAGCAAAAAGCACACTGCAGTGCAATGTGGGAAGCAGTAGCCCCGTCTATCTATGCTCTCTCTATCCTGGAAACAACGAGTCATTGCAATTAAATCTAGAGTTCGACGAAGTTGATCAAGTTGTTTTCTCTGTAATTGGCCCTCGGACCATTCATCTATGCGGTTACTATCTTGCCACTGCCCGCAATACCAATCTTATTGATGATTCGGAATCATATGGGGAGGATATTGCTGATACAGAAACAGAGGGATCTGATTACAGCGATGAAGACAAGTACGAGGATAATGAAGCTTTTCATGATAACAGACCAAAAAGTAGGAAAGGAAGCCTTCGACGGCTTAGAAAAAAGTACCAGTCAGTAGAGTCAGATGATGATGGCTGTTATGAAGAAAAGATAATTGGCAATGACAGTGTGCATGGCCAAACCCAGGAAATTGACGATGAAGATAGCCTACCTATTTCATCTCTTTACAAGAATAAAGCCTCTGGAAGGGTCTTGGACCAGGAAATGGATGCTGGTGTTGACATAGGAGCAGGTGATGCCAGCAACAAGAATGGTGAAGATGGTGGGAATAGTATCGTTGGAACAAATTTAAAGGCTGAACATGTCCTTGTAGATAGTCAGACGCACAGGGAAGCTGAATCGTCAAACCACATGGTAGATCCTCACACTGTTCAGGATGTTGGGGATATTAAAAATTTAAAAAAGAAAAAGAAGAGAAAGGGACAAGAGACTAAGAGCTCCTGTAATGGCCATTCTATCAAACTGGAAAAGATTACCCAGGATTTTATGACAGGAAATAAACAACAGCAGCATGCTGATGATAAGGAAACTGAAACCATGGATAAAATACTACCTTCCTCTCAGGTTGATCATGAACAGGGTGAAAAGCCAAAGAAGAAAAGGAAAGAACGGTCTGATGAGGGGGTGGTTTCAATTGCTACAGATGCTTATCATAACAATCTTGTTAATCTGCCTCTGAGAAATGAACACAATAAACAGCACACAGTTAATGAGGATGTTAATATATCAGGCAATGCATTGCCTTCTGCTGAGATGGATCCTAAAAAGAATAGAACAAAGAGGAAAAAGAAAGAACAAGTAAACAAAAGTGACAATGGATGTCATGAAGATATCATCCAAGAGGACAAAGCCAACAGAGATGCAGCAGAGTCACAGAATCTGATTCATAATTTTTTTGAAGAAAAACAGCAGCATCAGAAGCTAACTAATGAGAAGAGTGTGAACATTGGTGCCCATGACATTCCTGATGGAAATCAATCTGAGGATAGAAAAGTTAAGAAAAGGAAGAAAATGAGTAAAAGCCAGGGCAATGGGGAAGTTGTAAATTCTGATATGCCTGTATCTGTTGACCACAGTGGTGAGACTGGGACGACGGAGGAGGACAGAAATAAGAGGGAAGATGCAAAGCCTTCCCAAGTTAGAAAATTGTCAAATGGACTAGTCATTCAAGAACTAGAGAAGGGGATAAAAGATGGCATGCAAGTTGGAGAAAAGAGAAGACTTGTAATACCACCATCAATGACGTCTGAGAGTGATGGACACTGTGCCAAAATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTGGTTAAAGTTCATTGA 1743 0.4091 MAFWGVEIKPGKPFTHKYDDSKGRLHISMATLGLGTATAKSTLQCNVGSSSPVYLCSLYPGNNESLQLNLEFDEVDQVVFSVIGPRTIHLCGYYLATARNTNLIDDSESYGEDIADTETEGSDYSDEDKYEDNEAFHDNRPKSRKGSLRRLRKKYQSVESDDDGCYEEKIIGNDSVHGQTQEIDDEDSLPISSLYKNKASGRVLDQEMDAGVDIGAGDASNKNGEDGGNSIVGTNLKAEHVLVDSQTHREAESSNHMVDPHTVQDVGDIKNLKKKKKRKGQETKSSCNGHSIKLEKITQDFMTGNKQQQHADDKETETMDKILPSSQVDHEQGEKPKKKRKERSDEGVVSIATDAYHNNLVNLPLRNEHNKQHTVNEDVNISGNALPSAEMDPKKNRTKRKKKEQVNKSDNGCHEDIIQEDKANRDAAESQNLIHNFFEEKQQHQKLTNEKSVNIGAHDIPDGNQSEDRKVKKRKKMSKSQGNGEVVNSDMPVSVDHSGETGTTEEDRNKREDAKPSQVRKLSNGLVIQELEKGIKDGMQVGEKRRLVIPPSMTSESDGHCAKIPPNSWLVYDFELVKVH 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0007 580 Gene3D Nucleoplasmin core domain 1 99 - -
Aed5g0007 580 MobiDBLite consensus disorder prediction 481 499 - -
Aed5g0007 580 MobiDBLite consensus disorder prediction 114 129 - -
Aed5g0007 580 MobiDBLite consensus disorder prediction 378 416 - -
Aed5g0007 580 MobiDBLite consensus disorder prediction 285 306 - -
Aed5g0007 580 MobiDBLite consensus disorder prediction 114 151 - -
Aed5g0007 580 Gene3D - 435 580 IPR046357 GO:0003755
Aed5g0007 580 MobiDBLite consensus disorder prediction 500 518 - -
Aed5g0007 580 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 493 577 IPR001179 GO:0003755
Aed5g0007 580 MobiDBLite consensus disorder prediction 442 520 - -
Aed5g0007 580 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 537 580 - -
Aed5g0007 580 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 375 538 - -
Aed5g0007 580 SUPERFAMILY FKBP-like 479 579 - -
Aed5g0007 580 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Aed5g0007 580 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 484 580 IPR001179 GO:0003755
Aed5g0007 580 MobiDBLite consensus disorder prediction 327 348 - -
Aed5g0007 580 MobiDBLite consensus disorder prediction 245 348 - -
Aed5g0007 580 MobiDBLite consensus disorder prediction 392 416 - -
Aed5g0007 580 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 247 - -
Aed5g0007 580 PANTHER PEPTIDYLPROLYL ISOMERASE 1 247 - -
Aed5g0007 580 PANTHER PEPTIDYLPROLYL ISOMERASE 537 580 - -
Aed5g0007 580 PANTHER PEPTIDYLPROLYL ISOMERASE 375 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0007 Aed-Chr5 86757 96828 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0007 K14826 - gmx:100798135 628.632