Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2528 ATGGCTTCTTCTATTTCTATCCCATGCATCACTTCCAAGTTGCCTTCACCGCATGCCTCAAGCTTGGCCTCATCACGGTTTCTGGGCACCACCAGAAGAAGATCAGTTGGGTGGCTCAGCCTCACCGCCGACTCTAGAATTGGACCCTCCAACGGCTCCAGAGCCACGTGCTGGTTCAAGTTCGGCAAGAACGGAGTTGATGCCGAAGGTGCCGGCATCTATGGAAGCCAGGGCCGTAATGACTTTGATAGAGATGATGTCGAACAGTACTTCAACTATATGGGGATGCTTGCTGTAGAAGGCACATATGATAAAATGGAGGCTCTTCTAAGCCAAAACATCCACCCCGTGGACATCCTTCTCCTGTTAGCTGCTTCAGAAGGTGACAAGCCAAAACTTGAAGAACTCTTGAGAGCCGGAGCAAAATACGATGTGAAAGATGCAGACGGACGAACAGCACTGGATAGGGCTACAGACGAAATTAAAGATTTCATTCTTAGTTTTTCAGTGCAGAGGGCATGA 522 0.4904 MASSISIPCITSKLPSPHASSLASSRFLGTTRRRSVGWLSLTADSRIGPSNGSRATCWFKFGKNGVDAEGAGIYGSQGRNDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLLLAASEGDKPKLEELLRAGAKYDVKDADGRTALDRATDEIKDFILSFSVQRA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2528 173 SUPERFAMILY Ankyrin repeat 96 158 IPR036770 -
Aed4g2528 173 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 10 173 IPR044242 GO:0006886|GO:0009570|GO:0090391
Aed4g2528 173 Gene3D - 78 169 IPR036770 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2528 - - gmx:100500557 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2528 4 27210845 27212730 Aed4g2528 4 27210845 27212730 ECH