Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2487 ATGGCATCGTTTTGCGCTGCAAGGACTTTCCACATTCCGGCGATGAACGGCGGCGTTCTTCGCCGGCGGGAATCGTGGGCTGCCGGAATAGGCGGAGCCGCGGTTGCCGGCGCTGCGCTTTTGCGTTCGTGTTCGTCTAAGCGCTCTGCGCCATTCGCTTGCATGAGCCTCTCTACCGATACCCGGATAAAGGAAGCTGTTCAGACTGAAAAGGCCCCTGCAGCATTGGGGCCATATTCTCAAGCAATCAAAGCGAACAACCTTCTGTTTGTGTCAGGTGTTCTTGGCCTTATTCCTGAGACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGGTTCTCAAAAATATGGGAGAGATCTTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTTGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAATACTTCCCTTCACCTGCCCCGGCTCGGGCAACATATCAAGTAGCTGCCTTGCCAATGGATGCCAAGATTGAAATTGAGTGCATAGCAGCACTTTGA 564 0.4982 MASFCAARTFHIPAMNGGVLRRRESWAAGIGGAAVAGAALLRSCSSKRSAPFACMSLSTDTRIKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLIPETGKFISDNVEDQTEQVLKNMGEILKSGGASYSSVVKTTILLADLKDFKKVNEIYAKYFPSPAPARATYQVAALPMDAKIEIECIAAL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2487 187 SUPERFAMILY YjgF-like 64 187 IPR035959 -
Aed4g2487 187 ProSitePatterns Uncharacterized protein family UPF0076 signature. 163 181 IPR019897 -
Aed4g2487 187 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 64 186 IPR006056 -
Aed4g2487 187 CDD YjgF_YER057c_UK114_family 79 185 - -
Aed4g2487 187 Pfam Endoribonuclease L-PSP 70 186 IPR006175 -
Aed4g2487 187 PANTHER BNAA05G36080D PROTEIN 31 187 - -
Aed4g2487 187 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 31 187 IPR006175 -
Aed4g2487 187 Gene3D - 59 186 IPR035959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2487 Aed-Chr4 26927963 26931728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2487 K09022 - gmx:100785544 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2487 4 26927963 26931728 Aed3g2497 3 27455214 27457037 PCT