Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2477 ATGGTTCAGATCGCGAGGAGGAAGAAGGGACGGCCGTCGAAGGCAGATCTGGTGCGCCGCTCCGCCGAGTCTCCGACCAACGCGTCGCAGCCCAATTCCCGGCGGAGCCTTCGGCGCCGGAGCGTGAGGTACAACATCATCGACTACGATGGCGACTACATCGACGACGAGGAGGACGAGCGGAGGCGCGAGAAGAAGAAGCTCAAGCTCATGGCTAAGCTGAACCAGGACGGCGAAGAAGAAGAAGAAAACGAGTCGACTGCGCCGGTAAAGGGCAGAAAAGTGGAATCGAAAGGGCTCCACTCTGTTTCTGTTTCAGGAGCTCTGGTGACTCTTCAATCTGGGATTCCGTTGCCTGATAAGAGGACTCTGGAATTGATCCTTGACAAGCTTCAGAAGAAGGACACTTATGGTGTGTTTGCGGAGCCTGCTGATCCCGAAGAGCTTCCTGATTATCACGATGTGATCAAGCATCCCATGGACTTTGCCACTGTGAGGAAGAAGTTGGGAAATGGATCTTACACTACCTTAGAACAATTTGAGAGTGATGTATTTTTAATTTGCTCAAATGCAATGCAATACAATGCATCGGAGACTATATACCACAAACAGGCACGATCAATACAAGAACTTGGACAGAAGAAATTTGAGAAGTTAAGGATTGGCTTTGAACGCTCTCAGAATGAGTCGAAGTCAGAACAAAAAGCAGGATCCAATTATTTGGTTAAGAAACAACCAAAGAAGCCACTGGCACGTGCCTCACAAGAACCTGTTGGCTCTGATTTCATCTCAGGGGCAACTCTTGCTACTAATGCAGATGTACAGCCAACTTCCCAAGGTGGTAGATGTGAGAGGTCTGGCAAAATTGATGGTATTTTGGAGGCAAATGCTTTCTGGATTGATGCAAATCAAGATAAAGCTGAAGATGTTTTGTCAGGGAAAGGTCTCTCAAAGTGGGGAAAGGAGTCTTTTGTGCTTGACGAAAGTCGCCGTGCATCTTATAATATGTCCAATCAACCATTTGCTAGATCAGATTCAATATTTATGACCTTTGAGAGTGGAAGGAAGCATCTGGTTACTGTTGGACTTCATGCAGAATATTCCTATGCTAGGAGTTTGGCTCGTTTTAGTGCATCTCTAGGACCTATTGCTTGGAAAATTGCTTCCCACAGGATTCAGCAGGCACTGCCAGCTGGTTGTAAATTTGGTCGTGGTTGGGTTGGAGAGTATGAACCGCTTCCAACCCCAATATTAATGGTTAATAATTGTGTCCAGAAAGAAACTTGTGTGGTTATGAAGTTGCATTCCTCTACTGAATTACCAAAGTGTAACCAAAATCGTAAGAATTTGGAATCCAGCATCGAGCATCCTGTTAATAGACAGATGCTTGAGGGAAAACATCTTTCAGTGCCTGATTCTGCAGGAAAACCTTTCTTTGGTTCAGGAGTAAGGCTCAGTGCTCCTGTCAACATCCTAAGTCAGGAGCAGAACACCCAATCCAGGAAATTAGGCAATTCCGAGATTAAGGGTTTAAAACAAGTGGAGTTGAATTCTTTACCATCAAGTAATCAGAATAATAATGGTCTGATTGCAAACTTTACAAGTAATGCTCCTGCAGCAGAGTCCAAGCCTAGAAAGATGGTGCCAAGGAACATGTTCAAACAGCCAGATAATAATGGAGTTGTTAGTGGAGAGTTGCCTAATGGAAAAGCCATGAATACAAGTTTAAATAGACAGGTGACTGGTTCATCACCTGAAAGTACATCAAACCAATCACGCAGAGCAGCTCCTGCTGTTGTCCATGGGCAGGAGCAGGGTCATAGTGACCCAGTTCAGTTGATGAGAATGTTCACAGAAAGGGCTCAAAAGCAACACACTTCTTCCAATCATTCACTTGTTGATACTCCACCAGTGACACTGTCAGGTCCATCTGGACAGAGAGATGACTCGGGCAATGCTTCAGCAGCAGCTGCCCATGCATGGATGTCTGCTGGGGCAGGAGGGTTTAAACAAGGACCTGGAAATTCTAGTTCTCCCAAAAATCAGATGTCTGCGGATTCTTTGTACAACTCAACAAGAGAGTTCCATCAGCATATTTCAAGAATTCGGGGGGAGTTTCCCTCTGGTGGAATGCCTTTCCAACCATTTCAAGCAGTTGCTCCTCAACCTATTCACACAGGTGCTGTTTCACAGTTTCCCAACCAGCCCATGGTTTTCTCTCAGTTAGCATCTGCTGACCAATCTAGATTTCAAATGCAGTCCCCTTGGCAAGGTCTTAGTCCTCATAGCCAGTCAAGGCAGAAACAGGAAACCCTTCCACCTGACTTGAATATTGGTTGTCAATCACCAGGGTCACCTGCAAAACAATCTTCCAGTGTTCTTGTTGACTCACAGCAACCAGACCTAGCTTTGCAACTATGA 2421 0.4568 MVQIARRKKGRPSKADLVRRSAESPTNASQPNSRRSLRRRSVRYNIIDYDGDYIDDEEDERRREKKKLKLMAKLNQDGEEEEENESTAPVKGRKVESKGLHSVSVSGALVTLQSGIPLPDKRTLELILDKLQKKDTYGVFAEPADPEELPDYHDVIKHPMDFATVRKKLGNGSYTTLEQFESDVFLICSNAMQYNASETIYHKQARSIQELGQKKFEKLRIGFERSQNESKSEQKAGSNYLVKKQPKKPLARASQEPVGSDFISGATLATNADVQPTSQGGRCERSGKIDGILEANAFWIDANQDKAEDVLSGKGLSKWGKESFVLDESRRASYNMSNQPFARSDSIFMTFESGRKHLVTVGLHAEYSYARSLARFSASLGPIAWKIASHRIQQALPAGCKFGRGWVGEYEPLPTPILMVNNCVQKETCVVMKLHSSTELPKCNQNRKNLESSIEHPVNRQMLEGKHLSVPDSAGKPFFGSGVRLSAPVNILSQEQNTQSRKLGNSEIKGLKQVELNSLPSSNQNNNGLIANFTSNAPAAESKPRKMVPRNMFKQPDNNGVVSGELPNGKAMNTSLNRQVTGSSPESTSNQSRRAAPAVVHGQEQGHSDPVQLMRMFTERAQKQHTSSNHSLVDTPPVTLSGPSGQRDDSGNASAAAAHAWMSAGAGGFKQGPGNSSSPKNQMSADSLYNSTREFHQHISRIRGEFPSGGMPFQPFQAVAPQPIHTGAVSQFPNQPMVFSQLASADQSRFQMQSPWQGLSPHSQSRQKQETLPPDLNIGCQSPGSPAKQSSSVLVDSQQPDLALQL 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2477 806 MobiDBLite consensus disorder prediction 621 685 - -
Aed4g2477 806 MobiDBLite consensus disorder prediction 74 96 - -
Aed4g2477 806 SMART bromo_6 113 221 IPR001487 GO:0005515
Aed4g2477 806 MobiDBLite consensus disorder prediction 743 806 - -
Aed4g2477 806 MobiDBLite consensus disorder prediction 226 257 - -
Aed4g2477 806 ProSitePatterns Bromodomain signature. 138 194 IPR018359 -
Aed4g2477 806 SUPERFAMILY Bromodomain 116 219 IPR036427 GO:0005515
Aed4g2477 806 Pfam Bromodomain 126 206 IPR001487 GO:0005515
Aed4g2477 806 MobiDBLite consensus disorder prediction 670 685 - -
Aed4g2477 806 MobiDBLite consensus disorder prediction 20 35 - -
Aed4g2477 806 Gene3D - 119 239 IPR036427 GO:0005515
Aed4g2477 806 MobiDBLite consensus disorder prediction 556 596 - -
Aed4g2477 806 MobiDBLite consensus disorder prediction 1 41 - -
Aed4g2477 806 MobiDBLite consensus disorder prediction 538 607 - -
Aed4g2477 806 PRINTS Bromodomain signature 149 165 IPR001487 GO:0005515
Aed4g2477 806 PRINTS Bromodomain signature 165 183 IPR001487 GO:0005515
Aed4g2477 806 PRINTS Bromodomain signature 183 202 IPR001487 GO:0005515
Aed4g2477 806 Coils Coil 54 74 - -
Aed4g2477 806 ProSiteProfiles Bromodomain profile. 132 202 IPR001487 GO:0005515
Aed4g2477 806 CDD Bromodomain 120 216 - -
Aed4g2477 806 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 806 - -
Aed4g2477 806 MobiDBLite consensus disorder prediction 621 651 - -
Aed4g2477 806 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2477 Aed-Chr4 26859822 26866075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2477 K22184 - gmx:100799986 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2477 4 26859822 26866075 Aed4g2477 4 26859822 26866075 ECH
Aed4g2477 4 26859822 26866075 Aed3g2512 3 27518431 27524540 PCT