Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2475 ATGGGTATGGGGGGGAACAGAATTGTGATGGGAAATTCCTTTCTCTTCATCTCTTTCTTCATCTTCAACTTTGGTTTCTTGGAGGCTCAAAAGGCTCCAGCACTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAACAATTACTTGAGTCTCTCCATTGAAAAGGCAATTCTTCCTCATTATGGCATTGATTTTCCAACCAAGAAACCAACTGGAAGATTTAGCAATGGCAAGAATGCTGCAGATTTAATTGCTGAAAAATTGGGCCTACCCACTTCACCACCCTATCTCTCCCTAGTATCTAAAGTCCACATCAACAACAAGAACATATCTTTTTTGGGTGGTGTTAACTTTGCCTCCGGAGGTGCTGGAATATTTAATGCCTCAGATAAAGGTTTTAGTCAATCAATACCTTTGCCAAAGCAAGTGGAATACTACTCACAAGTGCATGAACAACTGACACAACAAATAGGAGCATCTACTCTTGGGAAACACCTCTCAAAGTCCATCTTCATTGTGGTGATTGGTGGCAACGATATCTTTGGTTACTTTGACTCAAAGGATCTTCAAAAGAAAAACACCCCTCAGCAGTACGTGGATTCCATGGCTTCCACATTAAAAGTGCAACTACAGAGATTATACAAGTATGGTGCAAAGAAATTTGAGATTGCTGGTGTTGGTGCAGTTGGGTGCTGCCCTGCATATAGGGTCAAGAACAAAACAGAATGCTTTTCTGAAGCCAATTACTTATCGGTTAAATATAATGAAGCTCTTCAGTCCATGTTAAAGGAATGGCAATTGGAGAACAAGGACATAAGTTACTCCTACTTTGATACTTATGCTTCTCTCCAAGACCTTGTTCACAATCCAACTCCTTATGGATTTGCTAATGTGAAAGCTGCTTGTTGTGGACTTGGTGAATTGAATGCCCAAATTCCATGCCTTCCAATTTCGAACATTTGTTCCAACAGAAAAGACCATGTTTTCTGGGATGCATACCATCCTACAGAGGCAGCTGCTCGAATCTTTGTGGATGAAATTTTTAATGGACCTTCAAAATACATTTCTCCTATTAATATGGAACAGTTACTGGCCATCTGA 1107 0.402 MGMGGNRIVMGNSFLFISFFIFNFGFLEAQKAPALYVFGDSLVDVGNNNYLSLSIEKAILPHYGIDFPTKKPTGRFSNGKNAADLIAEKLGLPTSPPYLSLVSKVHINNKNISFLGGVNFASGGAGIFNASDKGFSQSIPLPKQVEYYSQVHEQLTQQIGASTLGKHLSKSIFIVVIGGNDIFGYFDSKDLQKKNTPQQYVDSMASTLKVQLQRLYKYGAKKFEIAGVGAVGCCPAYRVKNKTECFSEANYLSVKYNEALQSMLKEWQLENKDISYSYFDTYASLQDLVHNPTPYGFANVKAACCGLGELNAQIPCLPISNICSNRKDHVFWDAYHPTEAAARIFVDEIFNGPSKYISPINMEQLLAI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2475 368 SUPERFAMILY SGNH hydrolase 33 350 - -
Aed4g2475 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 366 - -
Aed4g2475 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 9 366 - -
Aed4g2475 368 Gene3D SGNH hydrolase 25 354 IPR036514 -
Aed4g2475 368 CDD SGNH_plant_lipase_like 33 353 IPR035669 -
Aed4g2475 368 Pfam GDSL-like Lipase/Acylhydrolase 35 348 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2475 Aed-Chr4 26849873 26854687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2475 32 366 Acyl Lipid Metabolism Gene Families AT4G10950 33.819 2.07e-64 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2475 - - gmx:100790145 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2475 4 26849873 26854687 Aed4g2475 4 26849873 26854687 ECH
Aed4g2475 4 26849873 26854687 Aed3g2514 3 27528118 27529475 PCT