Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2445 ATGTTTGCTTACAGGGTTTTGTCCCGTTCCTCTGCCACCCTTTCTCGAAGCTTCACCCTTCTCTCTGTTTCACGAAATTCCCAACCCATCTCCACCACCTTCTCCAATAACTTCCATTCCCTCCTTCACCCATCTCCCAACAAGCTGATTCCTGTTCAAACCAATTTTCTGAATTCATCGTTGACTTCGAGATTCGGATTTTCTTCAACGGCACATGCAAGTAATGACCCTGTAAAGACAAGTGAAGAAGCAAAGGTAACTGATCAGTCTGAAGCTGCGGATCAAACCAAAGAATCAGATGTAGAGAGTGAGTGTGATCTGTCTAGGGATGATTTGATAAAGCTTGTTGCTGAGAAGGAGCAACTTTTGAAGTTGAAGCACAAGGAGATTGAGAAAATGCAGGATAAAGTTCTGCGAACTTATGCAGAGATGGAGAATGTCATGGACAGGACAAGACGTGATGCAGAGAATTCAAAAAAATTTGCTATACAGAGTTTTGCAAAGAGTTTACTGGATGTTGCTGACAATTTGGGCAGAGCTTCCTCAGTTGTAAAGGACAGCTTTTCAAAAATTGAATCTCCTAAGGAGTCTTCTGAAGCAGCACAACTCCTGAAAACACTTTTAGAAGGTGTTGAAATGACAGAGAAACAACTTGCAGAGGTACTCAAAAAGTTTGGTGTAGAAAGATTTGATCCTACAAATGAGCCATTTGATCCACACAGGCACAATGCCATCTTCCAAATGCCTGATGCTTCCAAGGCCCCTGGCACTGTTGGAGTTGTTCTGAAGGCAGGATATATGCTCTATGATCGCGTTCTTCGTCCGGCAGAAGTTGGTGTAACTCAAGAAGTGGAAAGCAGCTGA 864 0.4306 MFAYRVLSRSSATLSRSFTLLSVSRNSQPISTTFSNNFHSLLHPSPNKLIPVQTNFLNSSLTSRFGFSSTAHASNDPVKTSEEAKVTDQSEAADQTKESDVESECDLSRDDLIKLVAEKEQLLKLKHKEIEKMQDKVLRTYAEMENVMDRTRRDAENSKKFAIQSFAKSLLDVADNLGRASSVVKDSFSKIESPKESSEAAQLLKTLLEGVEMTEKQLAEVLKKFGVERFDPTNEPFDPHRHNAIFQMPDASKAPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVESS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2445 287 PANTHER GRPE PROTEIN 7 284 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aed4g2445 287 CDD GrpE 131 280 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aed4g2445 287 ProSitePatterns grpE protein signature. 237 280 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aed4g2445 287 Gene3D - 114 225 IPR013805 -
Aed4g2445 287 MobiDBLite consensus disorder prediction 78 103 - -
Aed4g2445 287 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 227 282 IPR009012 GO:0006457
Aed4g2445 287 MobiDBLite consensus disorder prediction 70 103 - -
Aed4g2445 287 PANTHER GRPE PROTEIN HOMOLOG 7 284 - -
Aed4g2445 287 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 118 226 IPR013805 -
Aed4g2445 287 Coils Coil 116 136 - -
Aed4g2445 287 Hamap Protein GrpE [grpE]. 75 282 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aed4g2445 287 PRINTS GrpE protein signature 138 154 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aed4g2445 287 PRINTS GrpE protein signature 234 249 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aed4g2445 287 PRINTS GrpE protein signature 261 280 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aed4g2445 287 Gene3D Head domain of nucleotide exchange factor GrpE 226 281 IPR009012 GO:0006457
Aed4g2445 287 Pfam GrpE 116 281 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2445 Aed-Chr4 26620650 26624015 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2445 K03687 - gmx:100812682 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2445 4 26620650 26624015 Aed4g2445 4 26620650 26624015 ECH