Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2430 ATGGCACAGACTAGTGGCAATGCTTTGGTGCAGTGGCTAGTAGCAGCATTGCTCATTGCCATGTTGGGTGCTGCCAAAGCTTATGATTTATGTGACATGGAATCAAACAAGCTAAGCTTATGCTATGCTGCAGTTACTGGGAACCACCCTCAAAAACCAAATAAAAAATGCTGTGAAGTTGTTAAAGATGCCAATTTGCCTTGCCTTTGCAGCTACAAGTCTATCCTGCCTGCACTTGGAATCAACCCCACCTATGCTTTGGCCTTGCCCAGTAAATGTGGTCTGAAAACACCACCTGAATGTAGAGTAAATGGATTAGGAAAGAGGCATTTAAATGAATTCAATGCAATGCATCCCCCAATAGCATCTATCTAA 375 0.4293 MAQTSGNALVQWLVAALLIAMLGAAKAYDLCDMESNKLSLCYAAVTGNHPQKPNKKCCEVVKDANLPCLCSYKSILPALGINPTYALALPSKCGLKTPPECRVNGLGKRHLNEFNAMHPPIASI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2430 124 CDD nsLTP_like 31 99 IPR044741 -
Aed4g2430 124 PANTHER LIPID BINDING PROTEIN-RELATED 1 102 IPR039265 GO:0005504|GO:0009627
Aed4g2430 124 PANTHER LIPID TRANSFER PROTEIN 1 102 - -
Aed4g2430 124 Pfam Probable lipid transfer 22 100 IPR016140 -
Aed4g2430 124 Gene3D - 27 101 IPR036312 -
Aed4g2430 124 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 103 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2430 Aed-Chr4 26534385 26535141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2430 1 100 Acyl Lipid Metabolism Gene Families AT5G55410 37.864 1.74e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2430 - - gmx:100812796 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2430 4 26534385 26535141 Aed4g2430 4 26534385 26535141 ECH