Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2427 ATGTGGAAGCCACGCGCAGTTCCCCGCGCGTTCTCTCTGCTCCTTCTTCTTCACTCAGTGCTGGCTTTGGTCTCTGCACAAGGATCTAATGGAACCACGTGGAACACTCTCACCGGAAGTCCACCATTGGTCATAGCACGTGGTGGGTTTTCAGGGATATTTCCTGATTCCAGTGAATTTGCCTATAATTTGGCTACACAAACTAGTTTGAAAAATATCATTGTATGGTGTGATGTGCAATTAACGAAAGATAGGGAGGGAATCTGCATCCCAAACATCAAGCTTCAAAGTGCTACTAACATTGTTCAAGTTTTTCAAAACAGAAGTAAGACTTACTCAGTTAATGGTGTACAAACCAGTGCCTATTTTTCTGTGGATTTCACCTTTAAGGAGCTGCATTCCAAGGTCTTCTTGGTTCAAGGAGATTTCACTCGATCAGACAAGTTCGATAACAATTTATTTCAAATTCTTACTGTGAATGACTTGGTTAAAAATGAAGCCCCGCCAGGATTGTGGCTGAATATTCAGCATGATACTTTCTATGCACAACACAATTTGAGTATGAAAAACTTTGTACTTTCTGTTTCTAGAACAGTAAATGTCAGTTATATCTCATCACCTGAAGCTGGTTTCCTGAGAAGTATAAGAGCACGCATCAGCCCAAAAATGACAAAACTGGTCTTCAGGTTTCTGGAAAAGGATGAAGTAGATCCATCAACTAATCAGACTTATGGCTCACTGTTAAAAAATTTAGCATCAATCAAGACATTTGCTTCAGGAATTCTTGTTCCCAAAGGATACATATGGCCTGTTGATCCAACAAGTCTTTATCTACTACCACATACATCTTTAGTCTCTGATGCGCACAAAGTGGGGCTGGAAGTCTTTGCTTCATATTTTCTGAATGATGTTCCAATCAGCTATAATTACAGTTATGACCCTGTTGCTGAGTACCTCAATTTCATTGACAATGGAAACTTCTCTGTTGATGGTGTGTTGTCTGACTTCCCCCTAACACCATCAGAAGCTATAGACTGCTTTGCTCACATAGGCCTTAATGCTCCAAAGAAAGTTAACACTTTGATCATTTCAAAATATGGAGCAAGTGGAGATTATCCTCCTTGTACTGACTTAGCATATGAAAAGGCTATTTCAGATGGTGTGGATGTTCTTGACTGTCCTGTTCAAATGTCAAAGGATGGAATACCATTTTGCTTAAGGTCTATTGATCTTATAGAGAGCACAAATGTTGCTCAATCAAGTTTCAGCAAACTTGGAAAAATTATCCCAGAGATCAAATCTGCCAATGGAATATTTACATTCCAGTTGACATGGGATGATATAAAAAGCTTGACCCCCTCAATGTTGAACCTGTATTATAGAAACTCTTTGTATAGGAACCCAAAATATAACAAGAAGGTGCAACTTTTAACATTGTCAGATTTCTTAAAGATGCCAAAAGGTCAGACTTCCCTATTGGGTGTTGAGATCACCATTGAGAATGCAGCCTATCTTGCCAAGAAACAAAACTTAAGTGTGACTGATGCAGTCATTGATACTTTGAGCAAAGCAGGTTATGATAAACCAGGGGCTCCAAAAGTTATGATTCAATCCACTAATAGTTCTGTACTGCTGAAATTCAAGGAGAAGACCAAGTATGAGCTTGTCTACAAGATTGATGGGATAGTTGGTGATGCTGTTGACTCAGCTATTTCAGATATCAAAAGATTTGCTCATTCTGTGGTGCTCAAAAAGGCCTCTGTATATCCTGTTAGTAAATTCTTCGTGACTGGCTCTACGAAGATTGTGCCAAAGTTCAAATCTTCTAATCTCTCTGTTTACGTAGAAACATTCAGCAATGAGTTTGTATCTCAGGCATGGGATTTCATGTCAGATGCAACTGTGGAGATCAACACATTTGTTCAAGATGCTGAAATTGATGGTGTCATCACAGACTTCCCAAAAACAGCTAATAGATACAGAAGGAACAGATGCTTGAGTTTGGGTGACAACAAACCTCCATACATGGAACCAGTTCAAGTAGGTAGCCTATTACTTGCCATGGACAAATATTCCTTGCCACCAGCTTTGGCTCCTGCCCCTCCCCTGACTGAAGCTGAAGTGACAGAACCCCCATTGCCTCCTCTTTCTAAAATAACCCCATCTAGCCTTATTGCTGGGACTGAACCAGGAGCACAACCACCGCGAAATGCACAGTCTAAGGTCACTGTCTGCTTCTTTCTGTCCACTCTGATTGTGCTTGTAGCTTCTCTTCTACTTTGA 2283 0.403 MWKPRAVPRAFSLLLLLHSVLALVSAQGSNGTTWNTLTGSPPLVIARGGFSGIFPDSSEFAYNLATQTSLKNIIVWCDVQLTKDREGICIPNIKLQSATNIVQVFQNRSKTYSVNGVQTSAYFSVDFTFKELHSKVFLVQGDFTRSDKFDNNLFQILTVNDLVKNEAPPGLWLNIQHDTFYAQHNLSMKNFVLSVSRTVNVSYISSPEAGFLRSIRARISPKMTKLVFRFLEKDEVDPSTNQTYGSLLKNLASIKTFASGILVPKGYIWPVDPTSLYLLPHTSLVSDAHKVGLEVFASYFLNDVPISYNYSYDPVAEYLNFIDNGNFSVDGVLSDFPLTPSEAIDCFAHIGLNAPKKVNTLIISKYGASGDYPPCTDLAYEKAISDGVDVLDCPVQMSKDGIPFCLRSIDLIESTNVAQSSFSKLGKIIPEIKSANGIFTFQLTWDDIKSLTPSMLNLYYRNSLYRNPKYNKKVQLLTLSDFLKMPKGQTSLLGVEITIENAAYLAKKQNLSVTDAVIDTLSKAGYDKPGAPKVMIQSTNSSVLLKFKEKTKYELVYKIDGIVGDAVDSAISDIKRFAHSVVLKKASVYPVSKFFVTGSTKIVPKFKSSNLSVYVETFSNEFVSQAWDFMSDATVEINTFVQDAEIDGVITDFPKTANRYRRNRCLSLGDNKPPYMEPVQVGSLLLAMDKYSLPPALAPAPPLTEAEVTEPPLPPLSKITPSSLIAGTEPGAQPPRNAQSKVTVCFFLSTLIVLVASLLL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2427 760 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 14 759 - -
Aed4g2427 760 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 14 759 - -
Aed4g2427 760 ProSiteProfiles GP-PDE domain profile. 42 344 IPR030395 GO:0006629|GO:0008081
Aed4g2427 760 SUPERFAMILY PLC-like phosphodiesterases 41 343 IPR017946 GO:0006629|GO:0008081
Aed4g2427 760 CDD GDPD_SHV3_repeat_2 361 660 - -
Aed4g2427 760 ProSiteProfiles GP-PDE domain profile. 360 661 IPR030395 GO:0006629|GO:0008081
Aed4g2427 760 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 343 IPR017946 GO:0006629|GO:0008081
Aed4g2427 760 Gene3D Phosphatidylinositol (PI) phosphodiesterase 359 660 IPR017946 GO:0006629|GO:0008081
Aed4g2427 760 Pfam Glycerophosphoryl diester phosphodiesterase family 76 338 IPR030395 GO:0006629|GO:0008081
Aed4g2427 760 Pfam Glycerophosphoryl diester phosphodiesterase family 367 656 IPR030395 GO:0006629|GO:0008081
Aed4g2427 760 SUPERFAMILY PLC-like phosphodiesterases 360 661 IPR017946 GO:0006629|GO:0008081
Aed4g2427 760 CDD GDPD_SHV3_repeat_1 42 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2427 Aed-Chr4 26505431 26517752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2427 5 760 Receptor kinase-like Gene Family AT4G26690 53.482 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2427 - - gmx:100814941 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2427 4 26505431 26517752 Aed4g2427 4 26505431 26517752 ECH