Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2416 ATGGCATCAAACCAGATCCTGAAAGAACTACAATGGGCTCAGCAAGCAATCAAATCTGAGGGCCTAAATCTGCACAGTGTTTCCTTCTACCTCTCCCAACCAACCTCAGGATGTTTTCAAGAAACAGACAACTCCATAAGCATAAACATTTCCAAGGAAAACCTTCCATTCTTTTCCAACCTCTTGACAACTCTAGCAGCACCTAGGAGCCCCCCCAACTCCTCCTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGACTCACAACAGGTAAGAAATCTTGGCATCTTGCTTGGGAATAACCAAAATGTGCAACAAGTGGTTTTTAGAAGAAACAGGTTCAATGGAAAAAGTTTGTCAGACCTTTCTGACATTCTGAAGGCAAATAAAGTGATCAAAGAGATCATGCTTTCAGAATCAGGTATAGGGTCTGTTGGAGCTGGACTCATTGCTTCTGCTCTTGTGGTGAATGATAGTTTGGAGGAGCTGCAGATATGGGAAGATTCAATAGGGTCAAGAGGTGCTGAGGAGCTTTCTAAGATGATTGAAGTTAACTCAACTCTTAAACTTTTGACAATTTTTGACTCAAATGCCATCACAGCTACCCCTCTTGTATCTGCAGTTTTGGCAAGGAACAGAAGGATGGAAGTTCATGTTTGGAGTGGAGAAAATGGGGACAAAAGTTCCAAGGTGGTTGAGTTTGTACCTGAGAACAACACACTTAGAATTTACAAGCTTAACCTCTCAGGAACTTGTAGGGTTACTTGCTCTTTAGGGATGAACTTCACGGTGAAGTCGCTTGACATGACCGGAGTCAAGCTAAAGTCGCGGTGTGCTAAGGAATTTAGGTGGGTTTTGGAACAAAACCAGACCCTCAAAGAGGTAAACTTGTCCAGAACATGCCTTAAAGACAAGGGCATTGTGTATGTTGCAGCTGGCCTCTTTAAGAACAGAAGTCTGCAAACCTTACATCTAAGTGGAAATTGGTTCAGTGGAATAGGTGTGGAGCATCTACTATGCCCTTTGAGTAGATTTTCAGCACTGCAGATGCAAGCCAACACTACTTTGACATGTGTTACTTTTGGAGGAGGGAGAACAAGAATAGGAAGGGATGGTCTAGCTGCTATTATACAGTTTCTTATAACCAATGAAACAGTGAGGAAGTTGAGGATTCATGATGATGAGAGTTTGAGATCAGATGACTTTGTTAAAATCTTCAAGAGTTTGGAGAAGAATGCTAGCTTGAAATGCTTGTCTCTACAAGGCTGCAAACGCGTGGAGGGAGAGACATTACTGCAGACAATCATGGAGACACTACAGATAAATCCTTGGATTGAAGATATTGATCTCTCCAGAACACCTTTACACAACTCTGGAAAGACTCGGGGGATTTATCAGAGATTAGGCCAGAATGAGAAGACTGAACCAGAAATGGATTTGGTCAAGGACATGCCACTAACAGAACCCAAGAGTTGCAGAGTTTTCTTTTGTGGCCAGGAATGTGCAGGCAAGATTCAAACAATTGTGAATCCAGTGGAGCAAGCTGTCAAGACAGTAGGCATGAAGATAAAAACTTTCAAGGATGAGGATACAAGGATTTCAATATGGAATCTTGCTGGTCAGCATGAGTTTTTATCCCTCCATGATCTTATGTTCCCAGGTCATGGAAGTGCATCATTTTTCATCATTATATCTAGTTTATTCAGGAAACCAAACAACAAAGAACCAAAAAGCTCAACTGAAATTGAAGAGGACCTGCAATATTGGCTCAGGTTCATAGTTTCCAACTCTAAAAGGGCAATACAACAATGTATGCTACCAAGTGTCGCTGTTGTTCTCACACACTTTGATAAAATCAACCAACCATCACAAAATTTGCAGCACGCAGTAGATTCAATTCAGAGATTGAGAGACAAGTTCCAAGGCTATGTTGAATTCTACCCAACTGTATTCACAGTAGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCATATCCGAAAGACAAGCAAGACAATTCTCCAAAGAGTGCCGCGAGTTTATCAACTTTGCAACGATCTGACACAGATTTTATCAGACTGGAGATCTGAGAACTACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGAGCTATGCCAAGTTAAAGTCCCGTCATTGAGAATTCGATCAAGACATGATAATAAAGAGAAGGTAGAAATGAAGAGAAGAACTATTGCTACATGTCTTCATCAAATTGGTGAAGTTATTTACTTTGATGAGCTGGGATTTCTAATTTTAGATTGTGAGTGGTTCTGTGGTGAAGCACTTGGTCAGCTGATAAAGTTGAATGTTAGGAAGCAACACTCCTCAGAAAACAATGGATTTGTTAGCAGGAAGGAACTGGAAAAAATCTTAAGAGGGAGTTTGCAGAGCCCTATTCCTGGTATGGGTTCAAAGGTATTTGAGAACTTAGATGCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAACTCTGTTATGAGCAAGATCCATCAGATCCAAATTCTCTGCTATTGATTCCTTCCATTCTTGAAGAAGGAAGAGGAAAACCTCAGAGGTGGCAGCTAAGCATGCCAGACTGCGTTTATACAGGACGCCATCTTGAGTGTGATGATTCAAGCCACATGTTTCTCACTCCAGGATTCTTCCCTCGTTTACAGGCAAGAGTTTTTGTTCCACACCTCTATACAATTGTGCACCTTCATAACAGAATAGAGGCTCTAAAGGATCAACATGGGGCAACTTACAGTCTTGAGAAGCACCTCATTTCAATCAGCATTAATGGAATCTACATAAGAGTAGAACTTGGAGGACAGTTGGGTTACTATATTGATGTCCTTGCATGCTCCACCAAAATCTTGACTGAAACTTTAAGATTCATTAATCAACTTATAATCCCTGCAATCCAAAGCGTTTGCCATGGGATAACCTTGACTGAGAATGTCATAAGACCTGAATGTGTGAGAAAACTGACACCCCCTAGATACAGAAAAACTCAACTTGCTTCCCTTCAGCAACTGAAACAAGCACTGCTTTCACTTCCAGCAGACAGCATGTATGATTATCAACACACATGGAGTCCAGTCCTAGACTCTGGTAGGCCAATTCTCCAAGATGGATTTGATTTTGCACGAGACCTTTTATCCGATGATGACTTCCGGGAAGTGTTGCATCGAAGGTATCATGACCTTTATGATCTTGCACAAGAGCTGCAAGTCCCCCCTGAAAACAACAACCCTGAAGGGCAAGGTCAATTAGCTTCAAGTGACGAAGCTGCAAAGATTGAACCAACCTTTGGTGGCATTGCGAAAGGGGTTGAAGAAGTTTTACAAAGACTCAAGATTATTGAACAAGAAATCAGAGATTTGAAGCAGGAAATCCAGGGTCTGAGATACTATGAACATAGACTTCTCCTTGAGCTTCATCGCAAAGTGAACCACCTGGCAACCTTCAATGTCCAGGTTGAGGAGAGGAAAGTCCCCAACATGATCTATTTTGTGAAGACAGAAAACTACACAAGGAGACTGGTCACAACCATGCTTTCTGGCATGAATGCTCTCCGGCTTCACATGTTATGCGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAGATGGGGTGTGAAATCATGCAAGTTGATAACATGGCTGTGAAGTCTTTGGCTCCATATATGAAGAAGTTCATGACATTGGTAACCTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGAATGGGGCAAATGATACCGGACTTGAGCAAGGAAGTGGCTCATTTGGCTGGCTCTTCAGTTCTCTATGGTACAGCTGGGGCAACTGCAGCTGGTATTGCAGGTGCGGCCGCTATGGGTCGCAGAAACAGGTCCATGGAAGGTTCAAGGGACATTCAACAAGACTTAAGAGCAGCACAGCAATGGGTGGTTGATTTCTTAAGGGAAAGAGAGTGCTCCTCAGGGAAGGATATTGCAGAGAAATTTGGACTGTGGCGAGTAAGGTATAGGGACAATGGTCAAATTGCATGGATATGCAGGAGGCACATGTATGCTAGATCTGCAGAGGTAATTGAAATGCCTGTTTGA 4107 0.4229 MASNQILKELQWAQQAIKSEGLNLHSVSFYLSQPTSGCFQETDNSISINISKENLPFFSNLLTTLAAPRSPPNSSLRNLEFHRVEWDSQQVRNLGILLGNNQNVQQVVFRRNRFNGKSLSDLSDILKANKVIKEIMLSESGIGSVGAGLIASALVVNDSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLVSAVLARNRRMEVHVWSGENGDKSSKVVEFVPENNTLRIYKLNLSGTCRVTCSLGMNFTVKSLDMTGVKLKSRCAKEFRWVLEQNQTLKEVNLSRTCLKDKGIVYVAAGLFKNRSLQTLHLSGNWFSGIGVEHLLCPLSRFSALQMQANTTLTCVTFGGGRTRIGRDGLAAIIQFLITNETVRKLRIHDDESLRSDDFVKIFKSLEKNASLKCLSLQGCKRVEGETLLQTIMETLQINPWIEDIDLSRTPLHNSGKTRGIYQRLGQNEKTEPEMDLVKDMPLTEPKSCRVFFCGQECAGKIQTIVNPVEQAVKTVGMKIKTFKDEDTRISIWNLAGQHEFLSLHDLMFPGHGSASFFIIISSLFRKPNNKEPKSSTEIEEDLQYWLRFIVSNSKRAIQQCMLPSVAVVLTHFDKINQPSQNLQHAVDSIQRLRDKFQGYVEFYPTVFTVDARSSASVSKLTHHIRKTSKTILQRVPRVYQLCNDLTQILSDWRSENYNKPAMKWKEFGELCQVKVPSLRIRSRHDNKEKVEMKRRTIATCLHQIGEVIYFDELGFLILDCEWFCGEALGQLIKLNVRKQHSSENNGFVSRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGKPQRWQLSMPDCVYTGRHLECDDSSHMFLTPGFFPRLQARVFVPHLYTIVHLHNRIEALKDQHGATYSLEKHLISISINGIYIRVELGGQLGYYIDVLACSTKILTETLRFINQLIIPAIQSVCHGITLTENVIRPECVRKLTPPRYRKTQLASLQQLKQALLSLPADSMYDYQHTWSPVLDSGRPILQDGFDFARDLLSDDDFREVLHRRYHDLYDLAQELQVPPENNNPEGQGQLASSDEAAKIEPTFGGIAKGVEEVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNHLATFNVQVEERKVPNMIYFVKTENYTRRLVTTMLSGMNALRLHMLCEFRGQMHVVEDQMGCEIMQVDNMAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLSKEVAHLAGSSVLYGTAGATAAGIAGAAAMGRRNRSMEGSRDIQQDLRAAQQWVVDFLRERECSSGKDIAEKFGLWRVRYRDNGQIAWICRRHMYARSAEVIEMPV 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2416 1368 Gene3D Ribonuclease Inhibitor 230 345 IPR032675 -
Aed4g2416 1368 Gene3D Ribonuclease Inhibitor 52 218 IPR032675 -
Aed4g2416 1368 Gene3D Ribonuclease Inhibitor 346 479 IPR032675 -
Aed4g2416 1368 Pfam Leucine Rich repeat 316 338 IPR001611 GO:0005515
Aed4g2416 1368 Pfam Leucine Rich repeat 288 309 IPR001611 GO:0005515
Aed4g2416 1368 SUPERFAMILY RNI-like 243 459 - -
Aed4g2416 1368 PANTHER PROTEIN TORNADO 1 1 1357 - -
Aed4g2416 1368 Pfam C-terminal of Roc, COR, domain 733 898 IPR032171 -
Aed4g2416 1368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 675 IPR027417 -
Aed4g2416 1368 Gene3D - 491 674 IPR027417 -
Aed4g2416 1368 SMART LRR_RI_2 129 156 - -
Aed4g2416 1368 SMART LRR_RI_2 157 184 - -
Aed4g2416 1368 SMART LRR_RI_2 317 344 - -
Aed4g2416 1368 SMART LRR_RI_2 289 316 - -
Aed4g2416 1368 SUPERFAMILY RNI-like 18 203 - -
Aed4g2416 1368 Coils Coil 1115 1142 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2416 - - gmx:100817598 2501.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2416 4 26397098 26402019 Aed4g2416 4 26397098 26402019 ECH