Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2386 ATGAACATGGGCGGCGACACCAACAAGGTTTGGGAAATCAGAGCTCTGAAGCGGAAACCCGCGGCAGAAGAAGCCACGAAGATGTTGGAGAAGATCGCCAAACAGGTCCAACCCATCATGCGCAAACACAAATGGAGGGTCAAACTTCTCTCTGAAATGTGCCCGAGCAATCCGTCTCTTCTGGGGTTGAATGTTGGAGCTGGTATACATGTGAAGTTGCGGCTACGGAGACCAAACAGGGATTCTGACTTTTACCCATTTGATGAGGTTCTGGATACGATGCTTCATGAGCTTTGTCATAATGCCCATGGCCCTCATAATGCCAACTTCTACAAGCTCTGGGATGAACTTAGAAAGGAATGTGAAGAGTTGATGGCTAAGGGAATAACTGGTGCAGGGGTGGGGTTTGATCTTCCAGGAAGGCGATTAGGTGGTTATTCCCGGCAACCTCCGCTTTCATCCCTCCATAAAACTGCCCTGTCAGCTGCACAAAAGAGAGCACAACTGGGATCTCTTCTTCCATCTGGACCAAAACGTCTAGGTGGTGATAGTGTTATAATGAAGGCCCTTAGTCCAGTACAAGCTGCTGCAATGGCTGCAGAACGGAGATTACAGGATGACATATGGTGTGGTTCTCAATCTTGTGAACATTTGGATCACGAAGATGTTGACTATGAAGTTGCTGAGAACATTGTGCATAAGGAGGAAAATGTGGAAAGCTCAAGACAAACAGACAATTCTACTCTACCTTCAAATCTGTTATCTCGAAAAAGAAGTCAGGATACCAATTCAAGTTTACCTGTTAACTCATCATCTAGTACTTCTGAATTTGTAGATTTGACTATGGATACACCGAAAATTAAACCTGTCACAGAGCATCAAACTGGACCTAAGCGAAGATGCAGCGGATCAGAAAGCATTTCACATTCTCAACCCAATTATCAGGCAGGATCTAGTTCGGAAAATTTATCAAGTGTGTCAGGGCGACACTGTGAAGAATCTGGAATGTGGGAGTGTACAATTTGCACTCTGTTGAATAAAAGATTGGCTCCCATATGTGAGTTGTGTGGCACTCAACAGCCAAAAGATGTTATTGCCAAATACAACACATGGTCTTGTAAATTCTGTACGTTAGAAAACAATGTGAAGTTGGAGAAGTGCTCAGCCTGTGATCAGTGGAGATACTCTCATGGCCCATCAGTATCAATCCGGGCACCCGACCTTGGTACATAG 1233 0.4485 MNMGGDTNKVWEIRALKRKPAAEEATKMLEKIAKQVQPIMRKHKWRVKLLSEMCPSNPSLLGLNVGAGIHVKLRLRRPNRDSDFYPFDEVLDTMLHELCHNAHGPHNANFYKLWDELRKECEELMAKGITGAGVGFDLPGRRLGGYSRQPPLSSLHKTALSAAQKRAQLGSLLPSGPKRLGGDSVIMKALSPVQAAAMAAERRLQDDIWCGSQSCEHLDHEDVDYEVAENIVHKEENVESSRQTDNSTLPSNLLSRKRSQDTNSSLPVNSSSSTSEFVDLTMDTPKIKPVTEHQTGPKRRCSGSESISHSQPNYQAGSSSENLSSVSGRHCEESGMWECTICTLLNKRLAPICELCGTQQPKDVIAKYNTWSCKFCTLENNVKLEKCSACDQWRYSHGPSVSIRAPDLGT 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2386 410 MobiDBLite consensus disorder prediction 234 322 - -
Aed4g2386 410 SUPERFAMILY Ran binding protein zinc finger-like 333 360 IPR036443 -
Aed4g2386 410 ProSitePatterns Zinc finger RanBP2-type signature. 337 356 IPR001876 -
Aed4g2386 410 MobiDBLite consensus disorder prediction 300 322 - -
Aed4g2386 410 ProSitePatterns Zinc finger RanBP2-type signature. 371 390 IPR001876 -
Aed4g2386 410 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 5 410 - -
Aed4g2386 410 MobiDBLite consensus disorder prediction 242 280 - -
Aed4g2386 410 Pfam Zn-finger in Ran binding protein and others 334 361 IPR001876 -
Aed4g2386 410 ProSiteProfiles Zinc finger RanBP2 type profile. 367 396 IPR001876 -
Aed4g2386 410 PANTHER ZINC ION BINDING PROTEIN 5 410 - -
Aed4g2386 410 Gene3D - 331 369 - -
Aed4g2386 410 ProSiteProfiles Zinc finger RanBP2 type profile. 333 362 IPR001876 -
Aed4g2386 410 Pfam WLM domain 9 205 IPR013536 -
Aed4g2386 410 SMART zf_4 335 359 IPR001876 -
Aed4g2386 410 SMART zf_4 369 393 IPR001876 -
Aed4g2386 410 ProSiteProfiles WLM domain profile. 1 205 IPR013536 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2386 Aed-Chr4 26200491 26203740 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2386 K22685 - gmx:100795976 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2386 4 26200491 26203740 Aed4g2386 4 26200491 26203740 ECH