Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2373 ATGGACGAAGGCGAGGGAGGGTACGGTGAGAGCGGCGATCCCATGGATCAGTTCCACAGTAACGAAGCCATATCAGCCGTCGCCGACGAGGGTTTCTTGGGCGAGGAAGACGATGATTACGAGGACCTTTACAACGACGTCAACGTCGGCGAAGGGTTCCTTCAATCGTTGCGCAAAAATGACGATTCGGGGTTCCGAAACGACGACGTCAACGAGAAGAAGCCGCCGCCTCCACCACCGGTTCCGGATGCCGCCGGGGTTTCGATACCGGGTGTCGGTGGCGGTGGAGAGGGTGTCGGTGGAAGCGGGATTGTGGAATCTAGGGTTTCGGGGAGGGTTGATGGGTTTCAGAATCAAGGGTTTAGAGGGAACGATGCGGGTGCCAAAGGTGGGATTAGGGTTGAATTAGGGAACCAATCTGGGAAATTGAGTGAAACTGAGGAGCAGGGTGGGAATGATGGTGCTGCAGTGCAGGTGATTGGGCAGCAACCACAAGGTGGGGTTGTTGGGAGTGTGGGAAATGAGGGTTTGGTGAGACAAGGTCAAGTTGGTGGTGGAGGGAATGTTATCAGGGTCGGTGGAAATGGTGTTGGGAACAGTGTGAGTGCTGTCAGTAGTGTTAATACTGGAGGAGTTGGAGGTGGTGCTGGTGTTGCTGCTGCTGGTTCTGGTGGCACTATATTGTTTGTGGGTGATTTGCATTGGTGGACTACTGATGCTGAGCTTGAAACTGAGCTTAGTAAGTATGGGCCTGTGAAGGAGGTGAAGTTTTTCGATGAGAAGGCGAGTGGGAAGTCGAAGGGGTATTGCCAGGTTGAGTTTTTTGACCCTTCTGCTGCCACTACTTGTAAGGAAGGGATGAATGGGCATGTTTTTAATGGGAGGCCCTGTGTTGTTGCATTTGCATCGCCTTTTACTGTTAAGAAAATGGGGGAGGCTCAGATAAATAGGAATCAGCAGATGAACCAATCTGCTGTTCCTCAGGGAAGGAGAGGCCCTGCTGATTCAGGTACTAAGCCTGGTGGGAGTAATATTTCGACGGGTGGTAATTACCAAGGTGGAGATGGGAATAGAGGTTATGGAGGAAGAGGAGGAGGTAACTGGGGGAGAGGGAATAATCCTGGTATGGGGAATAGGGGGGCTGTTAATCCAATGAGGAATAGAGGTGGTGGGATGGGTGGTAGAGGTATAATGGGCCATGGTGGAAATGGATTTGGACAGGGTATGGGTGGTACCCCTCCAATGTTGCATCCTCAGTCAATGATGAATCAGGGTTTTGATCCTGCATTTGGTGGTCCCATGGGTAGAATGGGTGGCTATGGAGGCTTTCCTGGTGCTCCGACGCCTCCGTTCTCTGGGATTTTGCCATCATTCCCTGGTGTTGGAGGTGTTGGTCTGCCTGGAGTTGCACCTCATGTTAATCCAGCCTTTTTTGGAAGAGGGATGCCTGTTAATGGTATGGGGATGATGCCAACGGCAGGCATGGATGGTCCTAATATGGGAATGTGGTCAGATCCGAATATGGGTGGATGGGGTGGTGAAGAGCCTGGTGGTGGGAAGGCTGGAGAATCAAGTTATGGGGAAGAAGCTGCATCAGATCATCAGTATGGTGAGGTGAGTCATGATAGAGCTGGGTGGCCTATGAGGGAAAAAGATAGAGGTTCAGAAAGGGACTGGTCTGGTTCTTCTGAGCGAAGGTATAGAGATGATAGAGATCAAGGATATGAGAGAGGTGCATCTAGAGAAAAAGATATGGGCCAAGATCATGAATGGTCTGAAAGAAGGCAGCGTGATGATAGAGAAACAGTCCGAGAACGATCCCGTGAGCGTGACCGTGAACGATCTCGTGACCGTGATCGTGATCGTGAAAGGGATCACCGTGAGCGTGATAGGCACAGAGAAGATAGGGACAGGTATGCTGATCATCACAGGTACAGAGACCGGGAAGCAGAGCACGATGATGAGTGGGAGAGGGGAAGGTCATCAAGGACCCACAGCAAGTCACGGTTATCACAAGAGGAAGAACACCATTCTAGGCCAAGAGATGCTGATTATGGGAAGAGGCGGCGGCTTACGTCTGAATAA 2085 0.5137 MDEGEGGYGESGDPMDQFHSNEAISAVADEGFLGEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGFRNDDVNEKKPPPPPPVPDAAGVSIPGVGGGGEGVGGSGIVESRVSGRVDGFQNQGFRGNDAGAKGGIRVELGNQSGKLSETEEQGGNDGAAVQVIGQQPQGGVVGSVGNEGLVRQGQVGGGGNVIRVGGNGVGNSVSAVSSVNTGGVGGGAGVAAAGSGGTILFVGDLHWWTTDAELETELSKYGPVKEVKFFDEKASGKSKGYCQVEFFDPSAATTCKEGMNGHVFNGRPCVVAFASPFTVKKMGEAQINRNQQMNQSAVPQGRRGPADSGTKPGGSNISTGGNYQGGDGNRGYGGRGGGNWGRGNNPGMGNRGAVNPMRNRGGGMGGRGIMGHGGNGFGQGMGGTPPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPTAGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQYGEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERGASREKDMGQDHEWSERRQRDDRETVRERSRERDRERSRDRDRDRERDHRERDRHREDRDRYADHHRYRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRLTSE 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2373 694 MobiDBLite consensus disorder prediction 498 694 - -
Aed4g2373 694 MobiDBLite consensus disorder prediction 339 353 - -
Aed4g2373 694 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 1 693 IPR034772 -
Aed4g2373 694 MobiDBLite consensus disorder prediction 319 384 - -
Aed4g2373 694 MobiDBLite consensus disorder prediction 1 105 - -
Aed4g2373 694 MobiDBLite consensus disorder prediction 31 45 - -
Aed4g2373 694 MobiDBLite consensus disorder prediction 534 694 - -
Aed4g2373 694 Gene3D - 219 373 IPR012677 -
Aed4g2373 694 SMART rrm1_1 227 300 IPR000504 GO:0003723
Aed4g2373 694 CDD RRM_CFIm68_CFIm59 228 301 - -
Aed4g2373 694 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 228 297 IPR000504 GO:0003723
Aed4g2373 694 SUPERFAMILY RNA-binding domain, RBD 221 311 IPR035979 GO:0003676
Aed4g2373 694 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 226 304 IPR000504 GO:0003723
Aed4g2373 694 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6-LIKE 1 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2373 Aed-Chr4 26094905 26096989 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2373 K14398 - gmx:100813748 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2373 4 26094905 26096989 Aed4g2373 4 26094905 26096989 ECH