Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2369 ATGCAGCTTCTCCGGGCAGTGCTGGCGGCGGTGCTGCTGATCGTCCTGTGCCTGACAACCAGCTCCTCCGCGCACAACATCACGACCATCCTGGCAAAGCACCCGGAGCTCTCGACCTTCAACCACTACCTGACCATGACCCACCTCGCCCCTGAAATCAACGGCAAGACCACCATCACCGTCTGCGCCGTGGACAACGCCGCCATGTCGGACCTCCTCTCGAAGCACCCCTCCATCTACACCATCAAGAACATCCTCTCCCTCCACGTCCTCCTCGACTACTTCGGCGCCAAGAAGCTCCACCAGATCACCAACGGCACTGCCCTCGCCGCCACCATGTACCAGGCCACCGGCACCGCCCCCGGATCCGCCGGCTTCGTCAACATCACCGACCTACACGGCGGCAAGGTCGGCTTCGGCGCCGAAAACAACGACGGCTCACTCGCTTCCACCTTCGTCAAATCCGTCGAGGAAATCCCTTACAACATCTCAGTAATCCAGATCAGTAAGGTTCTCCCCTCAGCCGCAGCGGAAGCACCTGCACCCGCACCCACACAGCAAAACCTCACCAGCATTATGTCCAAACACGGTTGCAAAGTCTTCGCCGACACACTTTCCGCTCACCCCGACGCTCTTAACACCTTCAACGACAACCTCGACGGCGGATTAACCGTCTTCTGCCCCGTCGACGACGCGTTTAAGGCGTTTCTCCCAAAATTCAAAAACCTAACCAAATCCGGTCAGGTCGCGCTTCTCGAGTTCCACGGTGTTCCGGTTTACCAGTCCAAAGCCACTCTCAAATCCAACAACGGACTTCAGAACACTCTCGCCACTGATGGCGCTAACAAATTCGACTTCAATGTTCAAAACGACGGTGAAGATGTTACTCTCAAGACTAAGCTCACCACTGCGAAGATCACCGACACGTTAATTGATGAACAGCCTCTCGCGATTTTCGCTATCAGTAAAGTGCTTCAGCCTAAGGAGTTGTTCAAGGGTCAGGCTGAGGCTCCGGCGCCAGCGCCGGAGCCTTCTGCCGCCGACGCTCCCGCGCCGTCCAAGAAGGGGAAGAAGAAGAAGAAGGCTGCTGATGCGCCGGCGGATGACTCCGACGCTCCTGCTGATTCCCCCGATGAAGCCGCCGATGCGACCGCCGACGACAGTAACGGCGCCTTTAGACGTGACGGCGGGAGGTACGGTGGTGTTGTTGCCTTGGCTTTGGGTTTGGTTTTTGGGTTACCGTTAGTGCTGTGA 1254 0.5766 MQLLRAVLAAVLLIVLCLTTSSSAHNITTILAKHPELSTFNHYLTMTHLAPEINGKTTITVCAVDNAAMSDLLSKHPSIYTIKNILSLHVLLDYFGAKKLHQITNGTALAATMYQATGTAPGSAGFVNITDLHGGKVGFGAENNDGSLASTFVKSVEEIPYNISVIQISKVLPSAAAEAPAPAPTQQNLTSIMSKHGCKVFADTLSAHPDALNTFNDNLDGGLTVFCPVDDAFKAFLPKFKNLTKSGQVALLEFHGVPVYQSKATLKSNNGLQNTLATDGANKFDFNVQNDGEDVTLKTKLTTAKITDTLIDEQPLAIFAISKVLQPKELFKGQAEAPAPAPEPSAADAPAPSKKGKKKKKAADAPADDSDAPADSPDEAADATADDSNGAFRRDGGRYGGVVALALGLVFGLPLVL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2369 417 ProSiteProfiles FAS1/BIgH3 domain profile. 185 325 IPR000782 -
Aed4g2369 417 MobiDBLite consensus disorder prediction 333 393 - -
Aed4g2369 417 ProSiteProfiles FAS1/BIgH3 domain profile. 24 172 IPR000782 -
Aed4g2369 417 SUPERFAMILY FAS1 domain 181 328 IPR036378 -
Aed4g2369 417 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 396 IPR033254 -
Aed4g2369 417 SMART fasc_3 224 328 IPR000782 -
Aed4g2369 417 SMART fasc_3 60 175 IPR000782 -
Aed4g2369 417 SUPERFAMILY FAS1 domain 30 172 IPR036378 -
Aed4g2369 417 Gene3D FAS1 domain 195 327 IPR036378 -
Aed4g2369 417 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 6 396 - -
Aed4g2369 417 Gene3D FAS1 domain 22 173 IPR036378 -
Aed4g2369 417 Pfam Fasciclin domain 198 327 IPR000782 -
Aed4g2369 417 Pfam Fasciclin domain 36 105 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2369 Aed-Chr4 26067024 26068277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2369 - - gmx:100810878 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2369 4 26067024 26068277 Aed4g2369 4 26067024 26068277 ECH