Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2367 ATGTCTCTGGGGTACGCAGAGAAGCTTTCCTACATAGAAGATGTTGGCAACGTTGGAATGGTCGAATATTTCGACCCATCCCATGTTCTGCGAGAGAAAATAGATCAACTTGCTATTATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACAGGTGCAGGAATATCAACTTCATGTGGTATACCTGATTTTCGAGGTCCTAAGGGAATTTGGACACTTCAGCGTGAAGGTAAAGCCTTGCCTGAAGCATCACTTCCATTTCATCGTGCAGCGCCAAGCTTGACACACATGGCTCTGGTTGAATTAGAAAAGGCTGGCATTTTGAAGTTCGTCATCAGTCAGAACGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTTGCTGAATTGCACGGAAATTCCTTCATGGAGACATGCCCTTCTTGTGGAGCAGAGTACTTCCGTGATTTTGAGGTAGAAACTATCGGTTTAAAGGAGACATCAAGGCGTTGTTCCGTATCCAAATGTGGGACAAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTTCAAAGGAGATGAATCCTGCTGAGAAGCACTGCAAACAGGCAGATATAGTGTTATGCCTGGGTACAAGTTTACAAATAACTCCAGCATGCAACTTGCCTCTGAAAGCAATTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGTAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTGCTCCATTTGTCAGGATTGATCTTTTCCAGATTATTATAGTGCAAGCTTTGAGCAACGGTAACCAATGTTTAATTATCTCCTTCTTGGACAGGGAAGATTACAAAGCAGCCATTCTGGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTTAGCGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCTGTTGATTTTAAGGTTTCAACTGACTGCTTTGACTTTGATAAGGACTACATATTCCAAAAGCTGAGAGACAAGGCAGTTGTTGAATCAAGATGTGGTCAGAATGGTGTTATTGAGAGGAAGACCATCTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATATTGTTCAGTACAGCATTGATTGTCTAAGTAATGGTGATCTTAAAAAAAGAAAAGCTAGTGTGACTGGTACAGGATCATCTAGGAAGCGTTCAAAAGGGTCCTCCAAGAGTAAATCTAGTAGATCAGAGAATATTAGGGGTCATATGTAA 1359 0.4157 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSLTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGAEYFRDFEVETIGLKETSRRCSVSKCGTRLKDTVLDWEDALPSKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKAIRGGGKVVIVNLQKTPKDKKASLVIHGFVDKVIAGVMDQLNMQIAPFVRIDLFQIIIVQALSNGNQCLIISFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCSSLEIDVPVDFKVSTDCFDFDKDYIFQKLRDKAVVESRCGQNGVIERKTILTPRSDVTTYAIVTNIVQYSIDCLSNGDLKKRKASVTGTGSSRKRSKGSSKSKSSRSENIRGHM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2367 452 Pfam Sir2 family 52 75 IPR003000 GO:0070403
Aed4g2367 452 Pfam Sir2 family 86 216 IPR003000 GO:0070403
Aed4g2367 452 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 1 290 - -
Aed4g2367 452 Gene3D - 135 184 - -
Aed4g2367 452 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 1 290 - -
Aed4g2367 452 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 287 IPR029035 -
Aed4g2367 452 MobiDBLite consensus disorder prediction 421 452 - -
Aed4g2367 452 ProSiteProfiles Sirtuin catalytic domain profile. 35 269 IPR026590 -
Aed4g2367 452 Gene3D - 36 262 - -
Aed4g2367 452 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 293 440 - -
Aed4g2367 452 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 293 440 - -
Aed4g2367 452 CDD SIRT7 45 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2367 Aed-Chr4 26042741 26052544 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2367 K11416 - gmx:100803586 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2367 4 26042741 26052544 Aed4g2367 4 26042741 26052544 ECH