Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2365 ATGAAACCGCCTAAACTTCCCTCTCCGTCACTCTCACGTGCGCTAGCACGTGCCCTAAGCTCCGCCACCACCACCACGCAATGTGGATTGCCGTTTCCTTCGAAGACGGTCACCACCGCGAACTTCGAATCGTCGCTGGCGGAGCTCCGGCGCCATGTCCGGTCGTCGGACTTCGTGGCCATCGACCTCGAGATGACCGGCGTGACCAGCGCTCCGTGGCGCGAGTCCTTGGAGTTCGACCGCTCCGACGTGCGGTACCTCAAGGTCCGCGACTCCGCCACCAAGTTCGCCGTCGTTCAATTCGGCGTTTGCCCCTTCCGTTGGGATCCCTCCAACCACTCCTTCGTTGCGCATCCGCACAATTTCTATGTTTTTCCTCGACAGGAGCTTGAAGGTTTGGGTCCATGTGATGAATTTCTCTGCCAGACCACTTCAATGGATTTCTTGGCTAAATACCAGTTTGATTTTAATGCTTGCATCCATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGCAAGCACTAAGGAGGTTGAGTTCTACATTTGATAGTGAGTGGTCAGACATTGGTAAATTAAAAGATGTTAGGGACATACCATTGCTCAGTGCCGCCGACATTTTGTTCACTGCACGAATGAAAAATAAATTCAGTGAATGGCGTGATGGGCTATTTCAGGAGCAAAATCAAGAAGACCAAATTCAAGAAATTTCAAAAGACTCAAAATTTCAAGTGATTTTTTTTGAGATGCATCCAACTCTTAGGCTTAATGGATTCACGTCTCACCAGCTTAAATTGATTCAGTTGGTCATCAGAAAACACTTCAAAGATCTTTCTTATGTCAGTGTGAACAGTGAGGCTTCTGGTTCACAACAATTAGTCGTATATACTGACTCAAAGGATGAATTAAACTTACTTCTGAAGAAGGTGAAAGAAGAAAATCACAGGGCAGAGGAGATGAAGATCCAATCTGCTGTGGGATTTCGCCATGTTATTGATCTCCTTTCATCAGAACAGAAGTTAATAGTTGGTCACAATTGTTTTCTAGATATTGCTCATGTCTACAGCAAATTTATAGGACCTCTTCCGGGGACTCCTGAAGAGTTTGTGACGTCTGTTAACAAGTGCTTTCCACACATTGTTGACACCAAGATACTCCTGAATACTAATTTGATGTTCCAAGAAAAGATGAAAAGGTCCAGAAAATCACTGGACTCTGCATTCACTTCATTTTGTCCACAAATTGCCGCTGGCTCCAGAAGCACTGATATAGTCTCACATGTGAAAGTGGACGTTGAGGTTGACGATTCAAGATCATGCAGCTGGAACCCTGGAGGCAAGCATGAGGCAGGATATGATGCCTTCATGACTGGATGCATCTTTGCCCAGTTATGCAGTGATTTAGGCATCGATTTTAAACTCTGTGATTCTTCAAAGCAATTATCTCTCAATGAAAAACTGCAGAAGTACGTTAATCGGCTATATCTTAGTTGGATGCACGGAGACATTATTGATCTAAATACTGGTAATAAGTTTGCAAATTCTTCACCCAGCCATAGCCTGAAGAAGCGGTACCCAAAAATTTTGTTTGAGAACATTGTTATTATTTGGGGATTTCCTTCTAAGCTGAAGGCAAATGAAGTAAGAAAGTGCATATCTGAAGTATTTGGAGCAACTTCTGTAGTTTCTGTCTTCCACTTGGATGCAACAGCAGCATTCGTTCAGTTTAGCAAACCTGAACTAGTTTCTGATTTTCTTTTAGTGAAGGATTCCTTAGAGAGAAGTGATGGTGCGATCTTGGTTTTGCATCCACTGTCAAAACTTTTGGAAGGTGGAAATACATGTGCTGCCAATTATGATACTTATAAAGAAATATGTGGTTCACACTTATCAGAAGTTCTGTTTGCTGATCAGGCAAAGGCAGTTGGTATAAACTGGAAGACCAAATTGGCAGAATACAAGGTAGCATCAATGGGCGAAGAACATGAAAATCCAAGTGTACAAGGTAATGTAAATACAACTATGAAGAGCGTAGAAAGGACCAAGCCAAACACAACGGATCCGTTAGGATATGCTCCATCTCGTGTGCAAGTCTCAACTTTTGAGATTGAAGATTCTTCTTGTGTTGCAGAAGCCAACTTATGA 2145 0.4312 MKPPKLPSPSLSRALARALSSATTTTQCGLPFPSKTVTTANFESSLAELRRHVRSSDFVAIDLEMTGVTSAPWRESLEFDRSDVRYLKVRDSATKFAVVQFGVCPFRWDPSNHSFVAHPHNFYVFPRQELEGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQERQALRRLSSTFDSEWSDIGKLKDVRDIPLLSAADILFTARMKNKFSEWRDGLFQEQNQEDQIQEISKDSKFQVIFFEMHPTLRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSEASGSQQLVVYTDSKDELNLLLKKVKEENHRAEEMKIQSAVGFRHVIDLLSSEQKLIVGHNCFLDIAHVYSKFIGPLPGTPEEFVTSVNKCFPHIVDTKILLNTNLMFQEKMKRSRKSLDSAFTSFCPQIAAGSRSTDIVSHVKVDVEVDDSRSCSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLCDSSKQLSLNEKLQKYVNRLYLSWMHGDIIDLNTGNKFANSSPSHSLKKRYPKILFENIVIIWGFPSKLKANEVRKCISEVFGATSVVSVFHLDATAAFVQFSKPELVSDFLLVKDSLERSDGAILVLHPLSKLLEGGNTCAANYDTYKEICGSHLSEVLFADQAKAVGINWKTKLAEYKVASMGEEHENPSVQGNVNTTMKSVERTKPNTTDPLGYAPSRVQVSTFEIEDSSCVAEANL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2365 714 PANTHER POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1 33 650 - -
Aed4g2365 714 Pfam CAF1 family ribonuclease 37 461 IPR006941 -
Aed4g2365 714 SUPERFAMILY Ribonuclease H-like 36 472 IPR012337 -
Aed4g2365 714 Coils Coil 300 323 - -
Aed4g2365 714 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 33 650 - -
Aed4g2365 714 Gene3D - 36 247 IPR036397 GO:0003676
Aed4g2365 714 Gene3D - 291 510 IPR036397 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2365 K01148 - gmx:100784997 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2365 4 26032115 26036872 Aed4g2365 4 26032115 26036872 ECH