Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1993 ATGGAGGAGAAGACGGAGAAGGTGAAGTCTGAGGCAGTGCAGATAATTGGAGCGTTTGAGGTTCTGCCTAAGCTCGTGGTTTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGTCGATCGAAGCGTGAAATGCCTTCTCTGTATCCACACGCCAAAGGCATATTGTTAGCGTTGAAAGAGAAAGGCATCGACGTTGCCATCGCCTCTCGCTCGCCAACTGCAGACATAGCTTCAGCTTTCCTCAACAAATTAAACCTCACCTCAATCTTCGTCGCACAGGAAATATATTCAAGTTGGACACACAAAACGGATCATTTTCAGAGAATTCATTCCAGAACCGCTGTCCCCTTCAACTCCATGCTCTTTTTCGATGACGAGAATAGGAACATCCAAGCGGTCTCTAAAATGGGAGTAACTAGCATTTTGGTTGGAGATGGGGTCAATCTTGGGTCGTTAAGGGAAGGCCTTACACAATTCTCTCGAAACTGGAATGCATCGCAGAAGAACAAGCAGAAATGGGTTTCCAAGTATACCAACAAGTCAGATACTTCCAACTCCGCTGCATCAAATTTAACATCCCATTGA 594 0.4562 MEEKTEKVKSEAVQIIGAFEVLPKLVVFDLDYTLWPFYCECRSKREMPSLYPHAKGILLALKEKGIDVAIASRSPTADIASAFLNKLNLTSIFVAQEIYSSWTHKTDHFQRIHSRTAVPFNSMLFFDDENRNIQAVSKMGVTSILVGDGVNLGSLREGLTQFSRNWNASQKNKQKWVSKYTNKSDTSNSAASNLTSH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1993 197 Pfam Acid Phosphatase 22 164 IPR010036 GO:0016791
Aed4g1993 197 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 4 171 - -
Aed4g1993 197 CDD HAD_MDP-1_like 23 146 IPR035679 -
Aed4g1993 197 SUPERFAMILY HAD-like 23 157 IPR036412 -
Aed4g1993 197 SFLD C1.5.2: MDP Like 4 171 - -
Aed4g1993 197 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 24 139 IPR010033 -
Aed4g1993 197 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 6 179 IPR010036 GO:0016791
Aed4g1993 197 MobiDBLite consensus disorder prediction 178 197 - -
Aed4g1993 197 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1-LIKE 6 179 - -
Aed4g1993 197 Gene3D - 5 182 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1993 Aed-Chr4 23457008 23458885 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1993 K17619 - gmx:100305763 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2056 10 24420935 24421768 Aed4g1993 4 23457008 23458885 PCT