Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1830 ATGGAAAGTGATCATGAAAGTGATGAGATAATGATGAAGAATATCCCAATCCCATGTTTAGATTTTTGCAATAAGGCAATAGAAGAAGGGAGTGAGGAGTGGAAAGAGATGAGCAAGAGAGTGAGAGAAGCATGTGAGAGTCACGGTTGCTTCCTCTTGATGTGTGATGAGATCATCCCAAAGGGTGTACGTGAAGAGATGTTTGATGGTATGAAAGCATTGTTTGATTTGCCTGAAGAAATAAAGCAGCAACACGTATGTTCAAAGCCTTATAGGAGCTACAATGGCAAGAACTCTATGATTCTTCCTCTCTGTGAAAGCTTTGGGATTGATGATGTTCCTCTCTCAGCTTCTGAGCCTGAGGTCTTCACTAACCTCATGTGGCCCCAAGGAAACCCACCTTTCTGTGAGGCATTGAAGACTATGAGCTTAAAGATGCTAGAACTAAGTTTCATGGTCATGAAAATGATTGTGGAAGGTTATGGGCTTCCCCAACATTACATTTCGGATGTTGAAAACATGAAGAGCTCTAGCTATTCACGATTGATCAAGTACCAGGTTCCTAAAAGTAAAAGCAATAGTAATGAGTTTGAGACTGCCCTGCCCCCTCACACTGACAATGGTGCCATAACCATCTTATGCCAACATGAAGTCCAAGGGCTTCAGGTGTTATCCAAAACAGGCAAATGGGTTGAATTGGACATACCCCAATACGGCTTTGTGGTCATTGTTGGTGATATACTAAAGGCATGGAGCAATGGGAGGGTTCATGCAGTGACACACAGAGTGGCGATGAGTGGAGGAAAAGAGAGGTACTCTTTTGGGGTATTTGCAATGCCAAAGGAAGAGATGGACATTGAGGTGCCACGTGAGTTAGTGGATGACAAAATTCATCCCCTTCGTTATCATCCATTCAACTATGGAGACTACTTTAACTACTTTGTTTCAAATCCCACAGAAGCTCTTCAAGTCTTTGCAGGTCTTTGA 987 0.4265 MESDHESDEIMMKNIPIPCLDFCNKAIEEGSEEWKEMSKRVREACESHGCFLLMCDEIIPKGVREEMFDGMKALFDLPEEIKQQHVCSKPYRSYNGKNSMILPLCESFGIDDVPLSASEPEVFTNLMWPQGNPPFCEALKTMSLKMLELSFMVMKMIVEGYGLPQHYISDVENMKSSSYSRLIKYQVPKSKSNSNEFETALPPHTDNGAITILCQHEVQGLQVLSKTGKWVELDIPQYGFVVIVGDILKAWSNGRVHAVTHRVAMSGGKERYSFGVFAMPKEEMDIEVPRELVDDKIHPLRYHPFNYGDYFNYFVSNPTEALQVFAGL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1830 328 Gene3D - 16 325 IPR027443 -
Aed4g1830 328 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 14 327 - -
Aed4g1830 328 SUPERFAMILY Clavaminate synthase-like 12 317 - -
Aed4g1830 328 Pfam 2OG-Fe(II) oxygenase superfamily 184 278 IPR044861 -
Aed4g1830 328 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 14 327 - -
Aed4g1830 328 Pfam non-haem dioxygenase in morphine synthesis N-terminal 17 109 IPR026992 -
Aed4g1830 328 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 175 280 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1830 Aed-Chr4 22510255 22512247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1830 12 277 Glycosyltransferase AT5G59530 24.354 5.09e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1830 - - gmx:100790408 527.324