Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1821 ATGGCTGCCACTACTCCTTCGTCTGCATACCCATTTGGAACCCCTTTCCACTCTCGAGCTCGAAGAGTGGATTGCTCAAGCTCCATGTTCCCCCTTCATGCAGACCTCTCTACAATTTCTATGTGCCCGCCGCGTTCTGCTTCCAAGGGATTAGTTGATCGAGTATATGCGCAGCTTGATAGTGATGATTACTACAGGGAGAAAGTTCCAACACCCATTCTTGACATGGTTGAAAACCCTCTTTGCTTGAAGAACTTATCTCTTAAGGAACTGAAACAACTAGCAGTTGAAATCCGTTCAGATTTATCTTCTATTATGTCTGGTACACAAATATCTCTGAAAGAAAGTATGGCAGTGGTGGAGCTGACAGTTGCAATACATCATGTTTTCAATGCTCCAGTAGACAAGATATTGTGGGATGTTGGGGATCAAACATATGCACATAAGATTCTTACAGGAAGGCGATCACTCATGACAACAATGAGAAGAAAGAATGGTCTTTCTGGTTTTACTTCCAGATTTGAGAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACAGTATTTCTGCTGGACTTGGTAGCATGGCAGTTGCACGGGATATTAAGGGGAGACGAGAATGTGTAGTTACAGTTATCAGTAATTGGACAACTATGGCTGGTCAGGCTTATGAGGCAATGAGCAATGCAGGATATTTGGACTCAAATATGGTTGTGATTTTAAATGATAGCCGTCACTCTTTACTTCCAAAAATTGAAGAGGGCCCAAAGACATCTGTCAGTGCCCTATCTAGTACCCTGAGCAAGCTCCAGTCCAGTAAATCTTTCCGAAGATTCAGAGAAGCTGCTAAGGTGGTACATGATGTTGATCAACAAAGAATTCCAGTGCGTTTTGTTATTACAAGTGCAGGATTGGTAGGTTCTGATGGTCCCCTTGAATGTGGAGCATTTGATATAAACTTTATGTCATGCTTACCAAACATGATTGTTATGGCACCATCTGATGAGGTTGAACTCATGCACATGGTGACTACTGCTACTCGCATCAATAATCAGCCAATCTGCTTTCGGTATCCAAGGGGTGCCCTGGTTAGGAAAGGCTACTCTATAGGTGATGGAATCCCCATAAAGATAGGAAGAGGAAGAGTTCTTGTTGAAGGTAAAGATGTTGCTTTCCTAGGATATGGATCGATGGTTCAGAACTGCCTAAAGGCTCATTCACTCCTTGCCAAGCTTGGCATTGAGGTGACTGTTGCTGATGCTAGGTTCTGCAAGCCCCTTGACATCAAGCTTCTGAGGCAGCTTTGTAAACATCACTCTTTTCTAATAACTGTTGAGGAAGGATCTATTGGAGGATTTGGTTCCCATGTTGCCCAGTTTATTGCAGTTAATGGACTACTCGATGGAAGAATTAAGTGGCGACCAATTGTTTTACCAGACAGATACATTGGGCATGCATCACCAAATGAACAGCTTGACCAAGCAGGGTTGAGTGGACATCACATTGCTGCCACCGCATTGAGTTTACTAGGCCGTACCCGTGAAGCTCTCCTATTTATGTGTTCCTGA 1572 0.4345 MAATTPSSAYPFGTPFHSRARRVDCSSSMFPLHADLSTISMCPPRSASKGLVDRVYAQLDSDDYYREKVPTPILDMVENPLCLKNLSLKELKQLAVEIRSDLSSIMSGTQISLKESMAVVELTVAIHHVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGSMAVARDIKGRRECVVTVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEEGPKTSVSALSSTLSKLQSSKSFRRFREAAKVVHDVDQQRIPVRFVITSAGLVGSDGPLECGAFDINFMSCLPNMIVMAPSDEVELMHMVTTATRINNQPICFRYPRGALVRKGYSIGDGIPIKIGRGRVLVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLITVEEGSIGGFGSHVAQFIAVNGLLDGRIKWRPIVLPDRYIGHASPNEQLDQAGLSGHHIAATALSLLGRTREALLFMCS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1821 523 Gene3D - 66 301 - -
Aed4g1821 523 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 280 390 IPR029061 -
Aed4g1821 523 SMART Transket_pyr_3 215 367 IPR005475 -
Aed4g1821 523 SUPERFAMILY TK C-terminal domain-like 375 511 IPR009014 GO:0003824
Aed4g1821 523 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 88 251 IPR029061 -
Aed4g1821 523 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN 18 287 - -
Aed4g1821 523 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN 285 522 - -
Aed4g1821 523 Pfam 1-deoxy-D-xylulose-5-phosphate synthase 74 288 IPR005477 GO:0008661|GO:0016114
Aed4g1821 523 Gene3D - 380 511 IPR009014 GO:0003824
Aed4g1821 523 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 18 287 IPR005477 GO:0008661|GO:0016114
Aed4g1821 523 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 285 522 IPR005477 GO:0008661|GO:0016114
Aed4g1821 523 Pfam Transketolase, C-terminal domain 380 503 IPR033248 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1821 Aed-Chr4 22422372 22429003 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1821 K01662 - gmx:100793268 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1821 4 22422372 22429003 Aed4g1821 4 22422372 22429003 ECH