Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1805 ATGAAGCTTTTTGTTTTTGTAATGTTTTCAATCCTATTGCTGAAACAATTGAGCCTGCTAGTTGTTGGAGACGTTGGCACTGCTGCTTCTTATGGACCACCATACATACCTACTGCTTGCGATGGGAATAGGGCAGGGCAATTTCCTCCGGGGAATCTGTTTGTGGCAGTGAATGAAGGGTTATGGGATAACGGAGCAGCGTGTGGAAGGAGATACAGAATAAGGTGCGTGAGTGGAAACAATAGGCCATGCAAAGGTGGTAGCATCGATGTTAAAGTCGTTGATTCCTGTTCAAGGTCACCCTGTCCCAACACCATCCTCATGTCAAATGATGCTTTTGCAGCTATTTCACGCTTTCCTCATGCAAAAATCAATATTGAATATACCCAGTAA 393 0.4402 MKLFVFVMFSILLLKQLSLLVVGDVGTAASYGPPYIPTACDGNRAGQFPPGNLFVAVNEGLWDNGAACGRRYRIRCVSGNNRPCKGGSIDVKVVDSCSRSPCPNTILMSNDAFAAISRFPHAKINIEYTQ 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1805 130 Pfam Lytic transglycolase 56 128 IPR009009 -
Aed4g1805 130 Gene3D - 24 130 IPR036908 -
Aed4g1805 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 130 IPR007112 -
Aed4g1805 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 2 130 - -
Aed4g1805 130 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 2 130 - -
Aed4g1805 130 SUPERFAMILY Barwin-like endoglucanases 22 130 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1805 Aed-Chr4 22282260 22282727 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1805 - - gmx:100792215 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1805 4 22282260 22282727 Aed4g1805 4 22282260 22282727 ECH