Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1802 ATGGTCCCTGCCCTGTGCCTAAGTTCCCCCAGAACTACACCAGCACCAGAATGCTTAGGTTTTGGTCAAGAAAGCCATACAAATTCAAAGCATATTGGAGTCAATTATGTGTTTCAAGGCCCTCTTACTACCAAATATCGCTTTGTCACTGCAAAGGCTGCAAATGGCAACCAAAACACAAACCGAAACACAAAACCGAATAGTGTGATTTGTGCTGACTGTGATGGAAATGGAGCTGTTCTATGCTCTCAATGCAAAGGCAGTGGGGTGAACTCTGTTGATATTTTCAATGGAAAGTTTAAAGCTGGTGACTCTTGTTGGCTTTGCGGTGGCAGGAAGGAGATGTTATGTGGGAATTGCAATGGAGCAGGCTTTGTTGGTGGCTTCTTGAGCACTTATGATCAGTAG 408 0.4436 MVPALCLSSPRTTPAPECLGFGQESHTNSKHIGVNYVFQGPLTTKYRFVTAKAANGNQNTNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDIFNGKFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1802 135 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 66 126 IPR036410 -
Aed4g1802 135 PANTHER PROTEIN BUNDLE SHEATH DEFECTIVE 2, CHLOROPLASTIC 17 129 - -
Aed4g1802 135 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 17 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1802 Aed-Chr4 22252253 22254089 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1802 - - gmx:100306315 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1802 4 22252253 22254089 Aed4g1802 4 22252253 22254089 ECH