Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1794 ATGATGGATCCAAGCAACCTTTTGGCAGCTGATGAACTTGAAGAAGTCCACCAAAATGGTGTTCATGATGAACTGTCTATTGCTTCCAATGTAGACCCTGGTGTTACCAAAATTACAGAAACTGCAGCTCCAAATGGAAATTTTGAAAACTTCATCCAGTGTGACAACACTGCAATTGATTACTCATCTAAGGCAGAAATCAAGGAAATATCAAATGATAACATAGATGTGAACAATTTCACCATTTCTAAGGAAGAGGAAGCAGAAATCATAGGTCGCACAGAGCAATTAAAAGTAGGAAAAGGTCCTGTCAAGAATAAGAATGCAAAACCACCAAGCCCCCGAGGCAGTCATGCAAGTTCAGTTAAAAAGAACAAAGATGACGAGGTAGCATCTGCTGTTTCAAATGGTACTTTTGCTTCAGACTCTCACCCAAGACAGCCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAGCACCCTGGAAAGTCTGACGCAGCACCTTCTGAAGCATCAATGGAGAAGACTAAACCACGATCATCAAAGAAAGGGCCCCTTGATAATCTTCAAGAAGAAACAGAATCTTCTTCTCCTACAGCAGAAGATGCCAAACCTCGCAGGGTGGGGGTGCTCCCAAATTATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAAAGAGTTCTACACTAAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGGAGAGTAACCTGCAAGCAAAAAGCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGAAAAAGTCTAGGATTTAAAGCAACTCCAATGCCAACCTTCTACCAGGAGCCTCCTCCTCCTAGGGTGGAGTTAAAAAAGGTGCCAACTACAAGAGCTAAATCTCCCAAGCTTGGCCGTAAGAAGAGTTCAACAAATTCAGAGCCAGAAGGAAACACTAGCAACATAGCTCGTCAAGTCCGTTTAAGTCTGGATGAGAAAGTGTCTCAGACTAACCCCTCTAAAGGAATTAGTCCTGTTCATCAAAAGAAGCCACAGCGAAAGTCTCTTCCTCCACGACTGACTTCTGGAAAGAGCAGTCTGTCCAATTCAGCATCTGCAAGGACCTCATCTAAGGCAGTGAATGGTGACAAAACCTCCTTATCAAGTGTAACAACTGAAGTTACCACCTTATCCAATGCAACTGGGGAAGAGAAAGTTGAAACAGCTACTAAAGAGTACAATGTCTTATTGGATGAGACAAGGAAAGCTCTTCCTCTGAATGTAGAGCCAGGTGAAACCAAAACTCTTGTGAATGGTGATTTAGTCATTGAAGAGAAACCACAACTCAACTTGGCACAAGAACTCATAGCAGCGGAGCACTAA 1386 0.4271 MMDPSNLLAADELEEVHQNGVHDELSIASNVDPGVTKITETAAPNGNFENFIQCDNTAIDYSSKAEIKEISNDNIDVNNFTISKEEEAEIIGRTEQLKVGKGPVKNKNAKPPSPRGSHASSVKKNKDDEVASAVSNGTFASDSHPRQPIKNRSLSDKQARLSKHPGKSDAAPSEASMEKTKPRSSKKGPLDNLQEETESSSPTAEDAKPRRVGVLPNYGFSFKCDERAERRKEFYTKLEEKIHAKEVEESNLQAKSKETQEAEIKMLRKSLGFKATPMPTFYQEPPPPRVELKKVPTTRAKSPKLGRKKSSTNSEPEGNTSNIARQVRLSLDEKVSQTNPSKGISPVHQKKPQRKSLPPRLTSGKSSLSNSASARTSSKAVNGDKTSLSSVTTEVTTLSNATGEEKVETATKEYNVLLDETRKALPLNVEPGETKTLVNGDLVIEEKPQLNLAQELIAAEH 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1794 461 MobiDBLite consensus disorder prediction 276 391 - -
Aed4g1794 461 MobiDBLite consensus disorder prediction 94 217 - -
Aed4g1794 461 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 451 - -
Aed4g1794 461 MobiDBLite consensus disorder prediction 359 391 - -
Aed4g1794 461 Coils Coil 235 255 - -
Aed4g1794 461 PANTHER PROTEIN WVD2-LIKE 4 2 451 IPR044833 GO:0008017
Aed4g1794 461 MobiDBLite consensus disorder prediction 174 193 - -
Aed4g1794 461 MobiDBLite consensus disorder prediction 131 148 - -
Aed4g1794 461 Pfam Targeting protein for Xklp2 (TPX2) domain 220 291 IPR027329 -
Aed4g1794 461 MobiDBLite consensus disorder prediction 307 346 - -
Aed4g1794 461 MobiDBLite consensus disorder prediction 149 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1794 Aed-Chr4 22192367 22197446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1794 - - gsj:114408962 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1794 4 22192367 22197446 Aed4g1794 4 22192367 22197446 ECH
Aed6g1150 6 16190114 16195569 Aed4g1794 4 22192367 22197446 PCT