Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1779 ATGGTGAAGAGCAGAGAAAAAGGACTCGCGCGAGCAAGAGCTGCGATGCGCATAGCAGCGGCGGCATTAGCTGGAACTGGAACAAATCTTACTGCGCCAAACGACGACATTCCCGCTGGAACAATTTATCGTAACCCTCGCTTATTTCACCAGAGCTACATGGAGATGGAGAAGATATTGAAGGTATACGTGTACCCAGATGGGGAGCTACCAATTGTTCACGATGCCCCCTGCAAGGACATATACTCGATTGAAGGGAGGTTCCTCCACGAGATGGAACATGGGGTTGGGAGGTTCAGGACCAACGACCCCACTGCGGCTCACGTTTTCTTTCTTCCATTCAGCGTAACATGGATGGTGAAGTACCTCTATAGTACAACCCACTCTTACGACTTGACTCCTTTAAAGAATTTTGTCTCTGACTATGTGAGACTCATATCCACGAGGTACCCCTTCTGGAATCAAACTCATGGTGCTGATCACTTCATGGTTGCTTGTCATGACTGGGGTCCTTATGCATCACAGGGAAACCCTTTCCTATACAACACCTCAATCCGGGTGATGTGCAATGCCAACACATCTGAAGGCTTCAACCCTCAAAAGGATGTACCTCTACCGGAAATCCACCTATACGGAGGAGAAGTATCCCCTAAACTCCTTTCACCTCCAGCGGCGGTGACACACCGCTATCTGGCCTTCTTCGCCGGAGGCATGCACGGGCCAATTCGGCCCATCTTGCTCCATCACTGGAACAACAGATCAGACATGCGTGTCTACGAGTATCTCCCGAAAGAGCTAGACTACTATTCCTTCATGCTGGAGTCAAAGTTCTGCCTTTGCCCAAGTGGGTATGAAGTGGCTAGCCCGAGAATCGTGGAGTCAATTTACGCGGAATGCGTGCCAGTGATCCTGTCAAAGAATTATTCGCTTCCATTCAGTGATGTGCTGCGGTGGGAGGCGTTTTCAGTGCAGGTGGAGGTTTCGGACATTCCAAGGCTCAAAGAGATTCTTAGTGCAATTCAGGATAGCGAGTACCGGAACCTCAAGAATGGAGTAAGGGCTGTCAGGAGACATTTTACTCTCAATCAGCCGGCTAAGAGATTTGATGTTTTTCACATGATCTTGCATTCCATATGGCTTAGAAGATTAGACGTAGATCTCAGATCATTTTAA 1173 0.4859 MVKSREKGLARARAAMRIAAAALAGTGTNLTAPNDDIPAGTIYRNPRLFHQSYMEMEKILKVYVYPDGELPIVHDAPCKDIYSIEGRFLHEMEHGVGRFRTNDPTAAHVFFLPFSVTWMVKYLYSTTHSYDLTPLKNFVSDYVRLISTRYPFWNQTHGADHFMVACHDWGPYASQGNPFLYNTSIRVMCNANTSEGFNPQKDVPLPEIHLYGGEVSPKLLSPPAAVTHRYLAFFAGGMHGPIRPILLHHWNNRSDMRVYEYLPKELDYYSFMLESKFCLCPSGYEVASPRIVESIYAECVPVILSKNYSLPFSDVLRWEAFSVQVEVSDIPRLKEILSAIQDSEYRNLKNGVRAVRRHFTLNQPAKRFDVFHMILHSIWLRRLDVDLRSF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1779 390 Pfam Exostosin family 58 339 IPR040911 -
Aed4g1779 390 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 5 385 - -
Aed4g1779 390 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 5 385 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1779 Aed-Chr4 22087726 22089805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1779 - - gmx:102659997 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1779 4 22087726 22089805 Aed4g1779 4 22087726 22089805 ECH
Aed6g1163 6 16342044 16347469 Aed4g1779 4 22087726 22089805 PCT