Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1776 ATGGGAAGCATGTCTCTTCTGAAGTGCTACCGACCCTTTTTCTCTATGGTTTTACCTCACTCCGCCCCACCCAGACCCCACGCCGCCATTTTCAGGAGGAAAAACCTACCTTCGTTTTGCTCCACCTCATCCCCGCCGTTGACGGCGGAGAAGGATTGCGGCAAGTCCGACGCTTTGAAGAATCCGTTGCCGGAGGTGTGGCTGCACAACACCATGAGTAAAACCAAGGAGCTCTTCAAACCCAAAGTGGATTCCAAAGTGGGAATGTACGTCTGCGGCGTCACCGCTTACGATCTCAGCCATATCGGACATGCTCGCGTATACGTCAATTTCGACCTTCTTTACAGATACTTTAAGCATTTGGGATTTGAAGTCTGTTATGTTCGCAATTTTACTGACGTAGATGACAAGATAATTGCTAGAGCAAATGAGTTAGGAGAAGATCCAATCAGTTTGAGCCGGCGATATTGTGAAGAGTTCTGTCAAGACATGGTAACACTTAATTGTCTATCTCCCTCTGTGGAACCAAAGGTCTCAGAGCACATGCCCCAAATTATTGGTATGATTGAGAAGATTCTTAATAATGGGTATGCCTACATTGTTGATGGGGATGTATACTTTAATGTAGAAAAATTTCCAGAATATGGGAAACTATCTAAGCGAAATCTAGAAGATAATCGAGCTGGTGAGAGGGTTGCAGTCGATTCAAGGAAGAAACATCCTGCTGATTTTGCTCTTTGGAAGTCTTCAAAGCTGGGGGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGGTGGCATATTGAATGCAGTGCCATGAGTGAAGCTTATCTTGGTTACTCTTTTGATGTCCATGGTGGAGGAATCGACCTTGTGTTTCCTCACCATGAGAATGAAATTGCTCAGAGCTGTGCTGCATGTAAGAAAAGTGATGTAAGTGTATGGATGCACAATGGTTTTGTCACCATTGACTCTGTGAAGATGTCAAAATCTTTGGGAAATTTTTTCACAATACGCCAGGTTATAGACATTTACCATCCACTGGCTTTGAGATATTTTTTGATGAGTGCACATTATCGATCTCCTATCAACTACTCAAATATACAGCTCGAAAGTGCTTCAGACCGCATTTTTTATATATATGAGACATTGCATGAATGTGAGAGCTTTTTGAATCAGCATGATCAGACAATTAAGAAGGATTCCATCCCGCAGGATACTTTGGATATTATTGATAAGTTCCATGATGTTTTTTTGACCTCAATGTCAGATGATCTTCACACTCCAGTTGTATTGGCTGGAATGTCTGATCCATTAAAATCAATCAATGATTTGCTGCAAACCCGTAAGGGGAAAAAACAACAATTTCGAATAGAATCACTTTCAGCTTTGGACAAGAGCATTAGGGGTGTCCTTACTGTTTTAGGACTTATGCCTGCAAGTTACTCTGAGGTTTTGCAGCAACTCAAGGAAAAAGCTTTAAAGCGTGCAAACTTGACAGAAGCCGAAGTCTTGCAGAAAATTGAAGATCGAGCTACTGCCAGAATAGAAAAGGAGTATGCTAAATCGGACGCAATTAGGAAGGATTTGGCTGTTGTCGGTATTACTCTTATGGACAGTCCAAATGGCACAACTTGGAGGCCTGCCATTCCTCTTCCACTTCAAGAGCTGCTCTAG 1683 0.4296 MGSMSLLKCYRPFFSMVLPHSAPPRPHAAIFRRKNLPSFCSTSSPPLTAEKDCGKSDALKNPLPEVWLHNTMSKTKELFKPKVDSKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFEVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFCQDMVTLNCLSPSVEPKVSEHMPQIIGMIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSKRNLEDNRAGERVAVDSRKKHPADFALWKSSKLGEPFWESPWGPGRPGWHIECSAMSEAYLGYSFDVHGGGIDLVFPHHENEIAQSCAACKKSDVSVWMHNGFVTIDSVKMSKSLGNFFTIRQVIDIYHPLALRYFLMSAHYRSPINYSNIQLESASDRIFYIYETLHECESFLNQHDQTIKKDSIPQDTLDIIDKFHDVFLTSMSDDLHTPVVLAGMSDPLKSINDLLQTRKGKKQQFRIESLSALDKSIRGVLTVLGLMPASYSEVLQQLKEKALKRANLTEAEVLQKIEDRATARIEKEYAKSDAIRKDLAVVGITLMDSPNGTTWRPAIPLPLQELL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1776 560 PANTHER CYSTEINYL-TRNA SYNTHETASE 65 554 IPR024909 -
Aed4g1776 560 PANTHER CYSTEINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 65 554 - -
Aed4g1776 560 SUPERFAMILY Nucleotidylyl transferase 66 372 - -
Aed4g1776 560 CDD CysRS_core 67 368 IPR032678 -
Aed4g1776 560 Gene3D - 369 550 - -
Aed4g1776 560 Pfam tRNA synthetases class I (C) catalytic domain 80 375 IPR032678 -
Aed4g1776 560 PRINTS Cysteinyl-tRNA synthetase signature 125 134 IPR024909 -
Aed4g1776 560 PRINTS Cysteinyl-tRNA synthetase signature 285 306 IPR024909 -
Aed4g1776 560 PRINTS Cysteinyl-tRNA synthetase signature 254 272 IPR024909 -
Aed4g1776 560 PRINTS Cysteinyl-tRNA synthetase signature 89 100 IPR024909 -
Aed4g1776 560 Gene3D HUPs 50 368 IPR014729 -
Aed4g1776 560 Hamap Cysteine--tRNA ligase [cysS]. 66 551 IPR015803 GO:0004817|GO:0005524|GO:0006423
Aed4g1776 560 TIGRFAM cysS: cysteine--tRNA ligase 68 549 IPR015803 GO:0004817|GO:0005524|GO:0006423
Aed4g1776 560 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 403 549 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1776 Aed-Chr4 22061693 22067278 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1776 K01883 - gmx:100786700 1066.6