Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1762 ATGATGACGGATTCCGGGGCTCACTTCTGCAACTCTTGTGGTGAACAAATTGGACTTGATGCTAATGGGGAACTGTTTGTGGCTTGTCATGAGTGCTATTTTCCAATTTGCAAGTCTTGTTTTGAATTTGAAATCAATGAGGGCCGTAATGTCTGCTTCAGATGTGCCACTCCCTATGCTGATAGAGCAAAGGATAATGATGATACCAAGGTTTATGAAAATCAGTCCACAACAGCTGCTCAGATCAGTGCTTCTCAGGATGTTGGGCTCCATGCTAGGCATATCAGTACTGTGTCCACTGTGGATAGTGAATTAAATGATGAATCTGGAAATCCAATCTGGAAAAATAGAGTGGAAAGCTGGAAGGAAAAGGATAACAAGAAGAAGAAGAAAAAGTCTGCTCCTAAGGCTGAAAAGGAGGCACCAATTCCACCAGACCAGCAGATGGAAGAAATACAGTCCTCAGAGGCTGCTGCTGCTGAACCACTTTCAATGGTTGCTCCAGTCTCAAAAACAAGACTCACACCATACAGAATTGTGATAATCATGCGACTGATAATCTTGGGTCTTTTCTTCCATTATCGAGTTACAAATCCTGTTGACAGTGCTTTTGGTCTGTGGTTGACATCCATCATATGTGAGATCTGGTTTGCATTTTCCTGGGTGTTAGATCAGTTCCCAAAATGGTATCCTGTCAATAGGGAAGCTTTTACTGACACGCTTTCTGCAAGGTATGAAAGACCTGGTGAACTCTCTCAGCTTGCTGCTGTGGATTTCTTTGTCAGTACAGTTGATCCTCTGAAAGAGCCGCCATTGATCACAGCTAACACAGTGCTTTCTATTCTTGCTGTGGACTATCCTGTGGATAAAGTATCCTGTTATGTGTCAGATGATGGTGCTGCAATGCTCACATTTGAGTCCCTTGTGGAGACAGCTGACTTTGCAAGAAAGTGGGTTCCTTTTTGCAAAAAGTTTTCAATTGAGCCACGCGCACCTGAGTTCTACTTTTCTCAGAAGATTGACTACCTGAAGGACAAAGTACAACCTTCTTTTGTGAAGGAACGTAGAGCAATGAAGAGGGACTATGAAGAGTTTAAAGTGCGAGTTAATGCTTTGGTAGCAAAGGCTCAGAAAACACCAGATGAAGGATGGACTATGCAAGATGGAACCTCATGGCCAGGAAACAACTCACGTGATCACCCTGGCATGATTCAGATACCTGATTTCTGCAAATTGGCTACCAAATTATTGAAAGGAGAGAATGTGGAAGTTTTCCTTGGACACAGTGGTGCCCATGACATAGAGGGAAATGAACTTCCCAGGTTGGTGTATGTTTCCAGAGAGAAAAGGCCAGGTTACCAACACCACAAAAAGGCTGGTGCTGAAAATGCACTGGTGAGGGTGTCTGCAGTTCTCACAAATGCTCCCTACATTCTCAATCTTGATTGTGATCATTATGTGAACAATAGCAAGGCTGTACGAGAAGCAATGTGTTTTCTGATGGATCCAGTAGTTGGCAGAGATTTATGTTATGTACAGTTTCCCCAGAGATTTGATGGTATCGATCGTAGTGATCGATATGCCAATCGCAACACAGTTTTCTTCGATGTTAACATGAAAGGACTTGATGGCATTCAAGGACCTATGTATGTGGGAACTGGTTGTGTTTTCAACAGACAAGCACTTTATGGCTACAGCCCACCTTCTATGCCCAAATTACCAAAATCATCGTCCTGCTGTTGTTGCCCCTCAAAGAAGCAAACCAAAGACGTCTCAGAGCTTTATAGAGATGCAAAGAGGGAAGAACTTGATGCTGCCATTTTTAATCTCAGGGAGATTGACAATTATGATGAATACGAGAGGTCAATGCTGATTTCACAAATGAGCTTTGAGAAAACATTTGGTTTGTCCACTGTTTTCATTGAATCTACACTAATGGAGAATGGAGGGCTTCCTGAATCTGCTGATCCCTCAATGCTGATCAAAGAGGCCATTCATGTTATTAGCTGTGGATATGAAGAGAAGACTACATGGGGAAAAGAGATTGGTTGGATCTATGGTTCAGTTACTGAGGATATCTTAACAGGGTTCAAGATGCAATGCCGGGGATGGAGGTCAGTTTATTGCATGCCCTTAAGGCCTGCATTCAAAGGATCAGCACCAATCAATCTTTCTGATCGTTTGCACCAAGTTCTTCGATGGGCCCTTGGATCAGTTGAAATTTTCTTCAGCAGACATTGCCCCCTCTGGTATGGTTTTGCAGGAGGTCGCCTCAAATGGCTGCAGAGACTGGCTTACATAAACACCATTGTCTACCCTTTTACATCCCTTCCTCTCCTTTCGAACCTTGCAAGTGCCCTCTTTCTTGGACTTTTCCTTTCCATTATAAGCACAAGTGTGCTTGAGTTGAGGTGGAGTGGTGTGACCATTGAAGCATTGTGGCGTAATGAGCAGTTCTGGGTTATTGGAGGAGTTTCAGCACATCTATTTGCTGTGTTCCAAGGGTTCCTGAAGATGTTGGCTGGTGTTGACACCAACTTCACTGTGACTGCCAAAGCTGCTGATGACACAGAGTTTGGTGACCTATACATCATAAAGTGGACCACACTCTTAATTCCTCCAACAACCCTTATCATTATTAACATGGTTGGTGTTGTTGCTGGATTTTCTGATGCACTGAATGGAGGATATGAGTCTTGGGGACCACTTTTTGGAAAGGTTTTCTTTGCCTTCTGGGTCATTCTCCATCTCTATCCATTCCTGAAGGGTCTCATGGGTCGCCAAAACCGCACTCCAACCATTGTTATATTGTGGTCAGTGCTGTTGGCCTCTGTCTTCTCTCTGGTTTGGGTCAGGATTAACCCTTTTATCAGCAGACCTGACAGTGCAAGCATTTCCCAGACCTGCATTTCTATAGATTGCTAA 2925 0.4356 MMTDSGAHFCNSCGEQIGLDANGELFVACHECYFPICKSCFEFEINEGRNVCFRCATPYADRAKDNDDTKVYENQSTTAAQISASQDVGLHARHISTVSTVDSELNDESGNPIWKNRVESWKEKDNKKKKKKSAPKAEKEAPIPPDQQMEEIQSSEAAAAEPLSMVAPVSKTRLTPYRIVIIMRLIILGLFFHYRVTNPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWYPVNREAFTDTLSARYERPGELSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEFKVRVNALVAKAQKTPDEGWTMQDGTSWPGNNSRDHPGMIQIPDFCKLATKLLKGENVEVFLGHSGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDLCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPMYVGTGCVFNRQALYGYSPPSMPKLPKSSSCCCCPSKKQTKDVSELYRDAKREELDAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSTVFIESTLMENGGLPESADPSMLIKEAIHVISCGYEEKTTWGKEIGWIYGSVTEDILTGFKMQCRGWRSVYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYGFAGGRLKWLQRLAYINTIVYPFTSLPLLSNLASALFLGLFLSIISTSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDTEFGDLYIIKWTTLLIPPTTLIIINMVGVVAGFSDALNGGYESWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLVWVRINPFISRPDSASISQTCISIDC 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1762 974 SUPERFAMILY Nucleotide-diphospho-sugar transferases 271 783 IPR029044 -
Aed4g1762 974 SUPERFAMILY RING/U-box 3 64 - -
Aed4g1762 974 Pfam Zinc-binding RING-finger 4 61 IPR027934 -
Aed4g1762 974 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 974 - -
Aed4g1762 974 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 81 IPR013083 -
Aed4g1762 974 Pfam Cellulose synthase 257 781 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed4g1762 974 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 427 566 IPR029044 -
Aed4g1762 974 MobiDBLite consensus disorder prediction 116 155 - -
Aed4g1762 974 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 6 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1762 Aed-Chr4 21960113 21965583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1762 2 974 Glycosyltransferase AT4G18780 78.465 0.0 1598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1762 K10999 - gmx:100806522 1779.61