Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1742 ATGGCCTCTGACGACAAAGAATTAGAAGAGCAACTTCTCGAAGCCGGGAACAGGCTTGTAGAAGATCCTCCTTCGTCGGTGGAGGAACTCCTCGCACTCCTAGAACAAGTAGAGAGCTGCCTATCAAGGGTTGAACAGTCACCTACTGATTCTATGCAAAATGCACTCTCTCCATCATTGAAAGCATTGATTACAGACACACTTTTAAAGCACACAGATGATGATGTCAAAGTTGCAGTTGCTTCTTGCATCAGTGAAATAACAAGGATTACTGCACCTGAAGCTCCTTATGATGATGATCAAATGAAGGAGGTATTTCAATTAATAGTATCATCATTTGAAAATCTAAATGATGAGTTAAGCCGATCATATTCAAAGAGGATCTCAATTCTTGAAACTGTTGCGAAAGTAAGATCATGTGTGGTAATGCTGGACCTTGAATGTGATGCCCTGATTTTGGAGATGTTTCAGCATTTCTTGAAAGCTATAAGGGAACATCATCCAGAAAATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATATATCTGTAGACCTGCTGTCTCCACTCCTGGCCAGCATTAAGAAAGACAATGAGGAAGTTTTTCCAATAGCCCAGAAATTGGGGGAGAGGGTCCTTGAAAGTTGTGCAACCAAGCTTAAATCCTACTTGGTTCAAGCAGTGAGTTCCTTGGATATATCTGTGGACGATTATAGTGCAGTACTTGCTTTAATATGCCACGATACATCTGATGATTTGGAGAAAAATGATACATGTGTTACTAGTGAGCATGCGGAAGATAAGAGTGAGTCAGGAAAACAATCACTGGATGAGTCAACAGATGTTGTTAAAAAGGATTCCAGGGAAGTTACATCCTCTCAGCAAGAAAATCCAGATGCAAATAAATCTCCAAAGTCGGTCATGAGCAATGGTGTTGCAGGGGTTGAAGAAGATAATGCTTTAGCTGATTCCGAGTCCATTAAAAAGCAAGAGGATGCTGATTGTTCTAATCACTCTAAAGGTTTGGATACATCTGGTCATGAGGTGCGTAATGATTTGGACATTGAAAAGGTTAGCAACAGTAAACAAAAAACAGAGCAAGCTACCAAGAAACCACGAAAGAAATCAAGCTCTTCAACTAAATTGGCAAAACCTTCCAAGGGTCAAGTTGCTGCTAACAAGAATGAAACTGAGAAAATGCTCGACTGTGAAAGCAACAGCAAGATAGTTCACAGTCCCTCTCATGAGGACCATTCTGTTGAAGCAGCAGGACCTTCAGAGAATGACAAAGAAATTGATGCTAAGATTTCATCACCAAAGGCATGCAATGATGAATCTGAAGTTGTTGCTTCTCCACCAAGTGAGAGCCTCTATGATGAAAATCATTCTAAGAAACCTGGACGAACAAAGAAGAAAGATCGCCCTGTAAAAGAAGGGACTGCAGATGATGTTTCAAAGGTGTCTGGTGGAGGAAGTGATTCGGAAGCCAAACCTGCCAGGCGGTCAGTGAAAAAGGCACTTGGTCAGAAGTCTGATGTGAAGAAAACTAGTGTGGTAGATTCAGTAAAAAAAGGAAGTGGGGCTGCAAATGATGCAGATTCAAAAAAGCACTCAGCTAAGAAATTTGATGAAAACAAAAAGGGCAGTGGTGTTTCCTCTTCAAGGAAGATGGAGGACAAGAAAAAGGGAGGTCAGGGGAAAGCTAACTCTGAAGCAGATGTTGCAAAATCATCTGTTATGGAGGTGCACAAGGAAATGGTTTCTTCTCCGAGGTCTGGTACAAAATCAACTAAAGATGGAAAGTCAGAGGAGACTCCCAAGACAAATGTGAAAAGGAAACGCACTCCAGGAAAAGAAAATGATTCTGGTGTGAAGGAATATGGTGAAAACCTTGTTGGTTTACGGGTCAAAGTTTGGTGGCCTAAGGATCATGAGTTTTACAAAGGTGTTGTTGATTCTTTTGATTCTGCGAAAAAGAGGCACAAGGTCTCGTATGATGATGGTGATGAAGAAACATTAAATCTTGTGAAGGAAAAATGGAAGGTCATTGAAGCTGACTCAGATGAAGATGAGGAAGAACAAAGTGATCACGCAGATCTTGATGCTTCCACTGATGTGCCATCAAAGAAGAAAGGGAAAACTAGTGCAGGTGAATCAACCAAACAAGGAAAGATGGATGCTTCTTCCAAAAGCGGTGGAGCAGCAGCATCCAATAGATCAAAGGGTGCATCCACGAAATCTAGCCAGAAGTCCAAAGATGGTAACAAATCCAAAGATTCCAAGACTAATAGCAAATCTGAGGATGAAGTTAGTAGAAAATCTAAGGACGGCACTCCTAAAAGTGGTAGCAGTAAATCTATTGTTGCTGGTAAAAAAATGAGTAATAAATCCAAAAATACTGATACTTCCAAGACAAGTGAATCAAAGGATGATGACAGTAGCACACCAAAACCCTCTGCCAAGTCTAATAAGCAAGAAACTTCAAAAAGTGGAAAATCCAAGCAAGAAACCCTGAAGACTGCCATTTCCAAAGGGAAGTCTCTCAAAAGTGGTGGAAAGACTAATGCTAATGGTACTGGCAAGGTGAAATCTATTTCATTGAAGAGAAAAGATTCTGAGAACGAGAACTCAGATGTTTCAGCAGGAGAGATAGAAGATACCAAGGGCAAGACTCCAAATTCATCAAAGGCACGAGGAAGTGAGCTGAAGAGCGGAAAGAAGCGTCGGAAAACCTAA 2757 0.4088 MASDDKELEEQLLEAGNRLVEDPPSSVEELLALLEQVESCLSRVEQSPTDSMQNALSPSLKALITDTLLKHTDDDVKVAVASCISEITRITAPEAPYDDDQMKEVFQLIVSSFENLNDELSRSYSKRISILETVAKVRSCVVMLDLECDALILEMFQHFLKAIREHHPENVFSSMETIMTLVLEESEDISVDLLSPLLASIKKDNEEVFPIAQKLGERVLESCATKLKSYLVQAVSSLDISVDDYSAVLALICHDTSDDLEKNDTCVTSEHAEDKSESGKQSLDESTDVVKKDSREVTSSQQENPDANKSPKSVMSNGVAGVEEDNALADSESIKKQEDADCSNHSKGLDTSGHEVRNDLDIEKVSNSKQKTEQATKKPRKKSSSSTKLAKPSKGQVAANKNETEKMLDCESNSKIVHSPSHEDHSVEAAGPSENDKEIDAKISSPKACNDESEVVASPPSESLYDENHSKKPGRTKKKDRPVKEGTADDVSKVSGGGSDSEAKPARRSVKKALGQKSDVKKTSVVDSVKKGSGAANDADSKKHSAKKFDENKKGSGVSSSRKMEDKKKGGQGKANSEADVAKSSVMEVHKEMVSSPRSGTKSTKDGKSEETPKTNVKRKRTPGKENDSGVKEYGENLVGLRVKVWWPKDHEFYKGVVDSFDSAKKRHKVSYDDGDEETLNLVKEKWKVIEADSDEDEEEQSDHADLDASTDVPSKKKGKTSAGESTKQGKMDASSKSGGAAASNRSKGASTKSSQKSKDGNKSKDSKTNSKSEDEVSRKSKDGTPKSGSSKSIVAGKKMSNKSKNTDTSKTSESKDDDSSTPKPSAKSNKQETSKSGKSKQETLKTAISKGKSLKSGGKTNANGTGKVKSISLKRKDSENENSDVSAGEIEDTKGKTPNSSKARGSELKSGKKRRKT 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1742 918 MobiDBLite consensus disorder prediction 267 299 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 328 380 - -
Aed4g1742 918 SUPERFAMILY Tudor/PWWP/MBT 637 679 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 504 526 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 725 757 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 706 724 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 787 808 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 871 899 - -
Aed4g1742 918 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 3 885 IPR039776 GO:0007064
Aed4g1742 918 MobiDBLite consensus disorder prediction 691 918 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 809 824 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 300 315 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 536 574 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 758 786 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 267 635 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 1 21 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 603 632 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 841 869 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 465 488 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 1 16 - -
Aed4g1742 918 PANTHER TRANSCRIPTIONAL REGULATOR 3 885 - -
Aed4g1742 918 MobiDBLite consensus disorder prediction 404 447 - -
Aed4g1742 918 Gene3D - 636 686 - -
Aed4g1742 918 Pfam Sister chromatid cohesion protein PDS5 protein 29 237 - -
Aed4g1742 918 SUPERFAMILY ARM repeat 30 245 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1742 Aed-Chr4 21780743 21788555 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1742 - - gmx:100809147 1373.99