Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1740 ATGGATAACGAATTGGAAGAGCAACTTCTCGAAGCCGGTAACAAGCTCGTAGATCCTCCCTCGTCTGTGGAGGAGCTTCTTCCACTCCTAGATCAAGTAGAGAGTTTCCTATCAAGGGTTGAACAGTCACCTACCGAATCTATGCAAAATGCACTCTCTCCATCATTGAAAGCATTGATTGCAGACAAACTTTTAAGGCACTCAGATGATGATGTGAAAGTTGCAGTTGCCTCTTGCATCAGTGAAATAACAAGAATCACTGCACCTGAAGCTCCTTATGATGATGATCAAATGAAGGAGGTCTTTCAGATAATAGTATCTTCATTTGAAAATCTACATGATAAGTTAAGCCAATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTTGCGAAAGTCAGATCATGTGTTGTAATGCTGGACCTTGAATGTGATCCCCTGATTTTGGAGATGTTTCAGCATTTCTTTAAAGCTATAAGGGAATATCATCCAGAAAATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATATATCCTTAGACCTGCTGTCTTCACTCCTGGCCAGCATTAAGAAAGACAATGAGGAAGTCTTTCCAATAGCCCAGAAATTGGGGGAGAGGGTCCTTGAATGTTGTGCAACCAAGCTTAAACCCTACTTGGTTCAAGCAGTGAAATCCTTGGGTATCTCTGTGGATGATTATAGTGCAGTACTTGCTTCAATATGCCAAGATACAACTGATGACTTGGAGAAAAATGATACATGTGTTACCAGTGAGCATGTGGAAGATAAGTGTGAGTCAGCAAAACAATCACCGGAGGAATCAACACATGTGGTTAAAAAGGATTCAAGGGAAGTTACACCCTCTCAACCAGAAAATTCTGATGCGAATATATCTCCAAAGTTGGTCATGAGCAATGGTGTTGCATGTGCTGGAGAAGATAATGCTTTAGCTGATTCCAAGTCCATTAAAAAGCAAGAGGATGCTGATTGTTCTAATCACTCTGAAGGTTTGAATGTATCTGGTCATGAGTTGCGTAATGATTTGGACACTGAAAAAGTTGACAATGGTAAACAGAAGTCAGAACCAGCTACCAAGAGACGACGAAAGAAATCAAGCTCTTCAACTAAATCAGCAAAACCTTCCAAGGGTCAAGTTGCTGCAAATGAGCAGGAAACTGAGAAAAACCAGGACTATGAAAGCAACAGCAATAAAGTTCCTAGTTCCCCTCACGAGGAACATTCTGTTAAAGCAGCAGGATCTCCAGAGAACGACAATGAAATTGATGCAGAGATTTCATCACCAAAGGCATGCAATGATGAATCTGAAGTTGTTACTTCTCCACCAAGTGAGAGCCACTATGATGAAAATCATTCGAAGAAACTTGGACGAACAAAAAAGAAAGTTCCCCCTGTAAAAGATGAAGCTGCTGAGGGTGTTTCAAAGGAGTCTGGAGGAGCTAGTGATTCAGAAGTCAAACCTGTCAGGCGGTCAGTGAAAAAAGCACTTGGTCAGAAGTCTGATGTGAAGAAAACTAGTGTGGTGGATTCCGTAAAAAAAGGAAATGGGGCAGCAAATGATTCAGATGCTAAAAAGCATTCAGCCAAGAAATTAGATGAAAACAAAAAGGGTAGTGGTGGATCCTCTTCAAGGAAGATGGAGGACAAGAAAAAGGGCAGACGGGGGAAAGCTAAGCCTGAAACAGATTTAGCAAAGTCATCTGCTATGGATGTGGACAAGGAAAAGGTTTCTTCTCCGAGGTCTGGTACAAAATCTACTAAAGATGAAAATGCACAGACTCCCAAGACAAATGTGAAAAGGAAACGCAGTTCAGGAAAAGAAAATGAGTCTAATGTAAAGGAATATGGTGAAAACCTTGTTGGTTTACGGGTCAAAGTTTGGTGGCCTGAGGATCGTGAGTTTTACACAGGTGTTATTGATTCCTTTGATTCTGCCAAAAAGAAGCACAAGGTCTCGTATGATGATGGTGATGAAGAAACATTAAATCTTGTGAAGGAGAAATGGAAGGTTGTTGAAGCTGACTCCGATGCAGATGAGGAAGAACAAAGTGATTGTGCAAGCCTTGATGCTTCCACTGATATGCCACCAAAGAAGAAAGGGAAAACAAGTGCTGAGTCAACTAAGCCAGGAAAGATGGATGCTTCTTCCAAAAGCGGCGGAACGGCAACAACCAATAGATCAAAGGGTGCATCCTCCAAGTCTAGCCAGAAGTCCAAAGATGGCAACAAATCCAAAGATTCCAAGACTATTAGCAAACCTGAGGATGAAGTTAGTAAAAAATCCAAGGCCAGCACTCCTAAAAGTGGTAGCAGTAAATCTATTGTTGCTGCTAAAAAAACAAGTAATAAATCCAAAAACACTGATAGTTCCAAGACAATTGAATCAAAGAATGATGACACCAGCACGCCAAAACCCTCTGCCAAATCTAAGCAAGAAACTTCAAAAAGTGGAAAGTCCAAGCAAGAAACCCTGAAGGCTGCCATTTCAAAAGGAAAATCTCTCAAAAGTGGTGGGAAGACGGATGCTAATGGAACGAGCAAGGTGAAATCTGGTTCATTGAAGAGAAAATATTCCGAGAATGAGAACTCAGATGGTTGA 2640 0.4102 MDNELEEQLLEAGNKLVDPPSSVEELLPLLDQVESFLSRVEQSPTESMQNALSPSLKALIADKLLRHSDDDVKVAVASCISEITRITAPEAPYDDDQMKEVFQIIVSSFENLHDKLSQSYAKRTSILETVAKVRSCVVMLDLECDPLILEMFQHFFKAIREYHPENVFSSMETIMTLVLEESEDISLDLLSSLLASIKKDNEEVFPIAQKLGERVLECCATKLKPYLVQAVKSLGISVDDYSAVLASICQDTTDDLEKNDTCVTSEHVEDKCESAKQSPEESTHVVKKDSREVTPSQPENSDANISPKLVMSNGVACAGEDNALADSKSIKKQEDADCSNHSEGLNVSGHELRNDLDTEKVDNGKQKSEPATKRRRKKSSSSTKSAKPSKGQVAANEQETEKNQDYESNSNKVPSSPHEEHSVKAAGSPENDNEIDAEISSPKACNDESEVVTSPPSESHYDENHSKKLGRTKKKVPPVKDEAAEGVSKESGGASDSEVKPVRRSVKKALGQKSDVKKTSVVDSVKKGNGAANDSDAKKHSAKKLDENKKGSGGSSSRKMEDKKKGRRGKAKPETDLAKSSAMDVDKEKVSSPRSGTKSTKDENAQTPKTNVKRKRSSGKENESNVKEYGENLVGLRVKVWWPEDREFYTGVIDSFDSAKKKHKVSYDDGDEETLNLVKEKWKVVEADSDADEEEQSDCASLDASTDMPPKKKGKTSAESTKPGKMDASSKSGGTATTNRSKGASSKSSQKSKDGNKSKDSKTISKPEDEVSKKSKASTPKSGSSKSIVAAKKTSNKSKNTDSSKTIESKNDDTSTPKPSAKSKQETSKSGKSKQETLKAAISKGKSLKSGGKTDANGTSKVKSGSLKRKYSENENSDG 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1740 879 MobiDBLite consensus disorder prediction 384 399 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 460 487 - -
Aed4g1740 879 Pfam Sister chromatid cohesion protein PDS5 protein 25 229 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 532 596 - -
Aed4g1740 879 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 2 878 IPR039776 GO:0007064
Aed4g1740 879 MobiDBLite consensus disorder prediction 850 865 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 803 833 - -
Aed4g1740 879 PANTHER TRANSCRIPTIONAL REGULATOR 2 878 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 273 308 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 752 776 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 607 627 - -
Aed4g1740 879 SUPERFAMILY Tudor/PWWP/MBT 632 674 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 273 295 - -
Aed4g1740 879 SUPERFAMILY ARM repeat 39 243 IPR016024 -
Aed4g1740 879 MobiDBLite consensus disorder prediction 496 522 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 334 630 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 722 751 - -
Aed4g1740 879 Gene3D - 624 681 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 777 802 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 686 879 - -
Aed4g1740 879 MobiDBLite consensus disorder prediction 348 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1740 Aed-Chr4 21759983 21768257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1740 - - gmx:106794129 1330.47