Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1728 ATGGTGAAAGAGAGTGAGAGCGGTGCAGTTCCGGAACCGGTGATGGATTCAGTCAACACCACTCTCTCCAACCTTCAACAACTCCGAACTCACTTCAAGGAGTTCTTGTCTCTCTCCGACCCTCAAACCCTCTCCCAAATGCCCCCTCTTCAACGAGCTCACTCCCTCTTCATCCTCGCCAAAATCACTTCTACCCTCCTTTCATTGAACCTAAGGTGTACTGGGGTCCACCCAGATGACCATCCCATCAAATCAGAGCTTCTCCACTGCGACCTTCTACTACCTTGA 288 0.5104 MVKESESGAVPEPVMDSVNTTLSNLQQLRTHFKEFLSLSDPQTLSQMPPLQRAHSLFILAKITSTLLSLNLRCTGVHPDDHPIKSELLHCDLLLP 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1728 95 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 7 89 IPR011082 -
Aed4g1728 95 Pfam Sas10/Utp3/C1D family 21 90 IPR007146 -
Aed4g1728 95 PANTHER EXOSOME-ASSOCIATED FACTOR RRP47/DNA STRAND REPAIR C1D-RELATED 7 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1728 Aed-Chr4 21653617 21656824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1728 K12592 - gmx:100795174 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1728 4 21653617 21656824 Aed4g1728 4 21653617 21656824 ECH
Aed6g1254 6 17341648 17346059 Aed4g1728 4 21653617 21656824 PCT