Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1720 ATGTTCCACTCTTCACTTGTTTCTGTCATGGCGGCGTTGGTGAATCCCTTTCTGTCACCCACTCGAACTTCCCTCTCTCGGCGAGTTTCAGCACCTCCAAAAAACCAACTACTCCTACGTTGGACTCTCTGCTCCTCTTCATTCAAACCATCACTGATATCTAAGCACGCCAGGTGTGGCGCCACTGCAGACATCAAAGCTGATAACGCGGTTCTTGTGGGTCCCGCCACCGAGGAGAAGCCAAAAGCTGGGGACTTTGACTATGATTGGACACAGGAATGGTACCCTTTGTATCTCGCTCAGAACGTGCCCGAAGATGCACCTTTGGGTCTCAGAGTCTTTGATAAACACCTCGTGTTGTTCAAGGATGGCAATGGCCACTTTCGCTGTTATGAAGATCGCTGCCCCCACAGGTTGGCAAAACTGTCTGAGGGACAGTTGATTGATGGAAGGCTTGAGTGTCTATACCATGGATGGCAATTTGAAGGGGAGGGCAAATGTCTTCCTGCTGATGCCAAAATCCCCAGGGCAGCTTGTGTTAAAACATATGAAGTGAGGGACTCTCAAGGTGTTATTTGGGTGTGGATGTCCCTCAAGACACCTCCAAATGATAGTAAATTACCATGGTTTGAGAACTTTGCAAGGCCAGGGTTTCAAGATATTTCCACGACTCATGAACTCCCTTATGATCACTCCATCCTTCTGGAGAACCTGATGGATCCTGCTCATATCCCAATCTCCCATGACAGAACAGATTGGACTGCGAAAAGGGAGGATGCTCAGCCACTGTGTTTTGAGGTCACCGAACGAACCGATAGAGGGTTTGCAGGCTGGTGGGGCAGAGAAAAAGATGGATCCATGCCTAACTTCTTGCGGTTCGAGGCTCCTTGTGTTCTACAAAACAACAGGGAAATTGTTGATGAGAAAGGTGAAAAAAACTACTTCAGTGGTTTGTTCCTTTGTAGACCAACCGGGCAAGGGAAATCCATGCTGATAGTGAGGTTTGGAGGAACAAAAAGATCACCACTTGCAAAAGTGTTTCCTAAGTGGTACTTACATCAGAATGCAAGCAAGGTGTTTGAGCAAGACATGGGATTCTTATCATCACAAAATGAAATTCTTTTGAAAGAGAAGGTTCCAACAAAGGAACTGTACCTGAATCTGAAATCATCAGACACATGGGTTGCTGAATACAGAAAGTGGATGGACAAAGCAGGGCATGGAATGCCATATCATTTTGGTCACAGCACTATCTCTTTGCCTAAGGAGCCTGCTGTGGTTGAGCATGCACCGGCTGGACTCGTTGCGGGACAATCGGCTTCTTCACCTACCAAGGGAGGCATTGGAACAATGCATGCACCGAATTTCGCCAACAGATATTTTAGGCATGTGATACATTGCAAAGGATGTAGAACTGTGGTCAAAGCTTTTGAAGCTTGGAAAAATGCCCTTTCAGCTGTGGCAGTTGCATTAGTTGCAGTGGCAATTCTGGTATCTGGGACACAATGGAAAGCCCTTCTCTTGGCTTCTGCAGCTCTTTGTACTGTTGGAGTGTATGCTTGCTCAACCGCCGTTGCAATGAATACAACAAACTTTATTAGGACGCATAGGAGATTGTGA 1620 0.4673 MFHSSLVSVMAALVNPFLSPTRTSLSRRVSAPPKNQLLLRWTLCSSSFKPSLISKHARCGATADIKADNAVLVGPATEEKPKAGDFDYDWTQEWYPLYLAQNVPEDAPLGLRVFDKHLVLFKDGNGHFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCLPADAKIPRAACVKTYEVRDSQGVIWVWMSLKTPPNDSKLPWFENFARPGFQDISTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDEKGEKNYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLAKVFPKWYLHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYFRHVIHCKGCRTVVKAFEAWKNALSAVAVALVAVAILVSGTQWKALLLASAALCTVGVYACSTAVAMNTTNFIRTHRRL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1720 539 SUPERFAMILY Bet v1-like 190 408 - -
Aed4g1720 539 Gene3D - 216 407 - -
Aed4g1720 539 Pfam Pheophorbide a oxygenase 293 378 IPR013626 GO:0010277
Aed4g1720 539 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 94 194 IPR017941 GO:0051537
Aed4g1720 539 Pfam Rieske [2Fe-2S] domain 93 173 IPR017941 GO:0051537
Aed4g1720 539 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 69 539 - -
Aed4g1720 539 Gene3D - 89 213 IPR036922 GO:0051537
Aed4g1720 539 SUPERFAMILY ISP domain 80 202 IPR036922 GO:0051537
Aed4g1720 539 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 69 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1720 Aed-Chr4 21605495 21608758 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1720 - - gmx:100808233 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1720 4 21605495 21608758 Aed4g1720 4 21605495 21608758 ECH