Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1719 ATGAAGATAGCGGTGGAAGGGTGCATGCACGGTGACCTGGAGATTGTGTACAGAACCCTTCAACAGTTGGAGCAATCCCAAAACACGAAAATCGACCTCCTCATCTGCTGCGGCGATTTCCAAGCCGTGAGGAACAAGCATGACTTGAATAGCCTCAACGTCCCACCCAAATACCGCTCCATGAACTCCTTCTGGAAGTACTATTCCGGCGCTGAGGTTGCCCCCTACCCCACCATCTTCATTGGCGGCAACCACGAAGCCTCCAATTATCTCTGGGAACTGTTTGGGAATGTTCGAATTGGTGGCCTCTCTGGGATTTATAGTGGTTATGACTATAAATTAGGACACTTTGAGAGGCCTCCCTATGATCAGAGTACCATTAGGTCTGTGTATCATGTTCGTGAATATGATGTTTGCAAGCTGATGCAAGTCAAGGAGCCAATTGATGTTTTTCTTTCGCATGATTGGCCCATGAGAATCACTGATCATGGGGATTGGAGGGATCTTGTTCGCCGCAAGCAATTTTTTAAGAAAGAGGTAGAGGAAAAAAGACTAGGGAGTAAAGCTGCAGCTGAACTTCTGGAAAAACTGAAGCCACATTATTGGTTTTCAGCTCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGTGAAGGAGGTCCACTGACAAAATTCCTTGCACTGGATAAGTGTATTGTTGGGCGTGATTTCTTACAGATTGTGGAAATTGAATCAGATGCAGGACCTTATGAGATTCAGTATGATGAAGAATGGTTAGCTATAACACGGAGGTTCAACCCTATATTCCCTTTGACACACAAAGGTGCAGACTTCAGAGGCTTAAGTATTGAGATGGAAGACTGTCTTAAATGGGTTAGAAGCAGGCTACAAGAGAAGGGGTGCAAACCTTTTGAATTTGTTAGAACAGCTCCATGTTATGACCCTTCAGGATCCAATTTTGATGGTGCTTTTGCTGTGAATCCCCGAAATCCTCAGACAGAATCTTTTTTACAGCTTCTGGAACTTCCATATCTTCTTGATAGGAATCCTGAAGCAAATGACTTGTCACCTTATCCTCCTCCTTCATTTCAAAGAGGCATTGCTAGTGATAGCGAGGACATTCCCATTGATGATGTGGATGATGATGATGATGAAGAGCTCCCAAAAGTTGATAACGTTGAAACCGAGACTTCAAATTCGTGA 1206 0.4411 MKIAVEGCMHGDLEIVYRTLQQLEQSQNTKIDLLICCGDFQAVRNKHDLNSLNVPPKYRSMNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELFGNVRIGGLSGIYSGYDYKLGHFERPPYDQSTIRSVYHVREYDVCKLMQVKEPIDVFLSHDWPMRITDHGDWRDLVRRKQFFKKEVEEKRLGSKAAAELLEKLKPHYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCIVGRDFLQIVEIESDAGPYEIQYDEEWLAITRRFNPIFPLTHKGADFRGLSIEMEDCLKWVRSRLQEKGCKPFEFVRTAPCYDPSGSNFDGAFAVNPRNPQTESFLQLLELPYLLDRNPEANDLSPYPPPSFQRGIASDSEDIPIDDVDDDDDEELPKVDNVETETSNS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1719 401 SUPERFAMILY Metallo-dependent phosphatases 1 221 IPR029052 -
Aed4g1719 401 Gene3D - 1 227 IPR029052 -
Aed4g1719 401 CDD MPP_Dbr1_N 3 239 IPR041816 -
Aed4g1719 401 MobiDBLite consensus disorder prediction 374 391 - -
Aed4g1719 401 Pfam Lariat debranching enzyme, C-terminal domain 224 344 IPR007708 GO:0006397|GO:0016788
Aed4g1719 401 MobiDBLite consensus disorder prediction 352 401 - -
Aed4g1719 401 Pfam Calcineurin-like phosphoesterase 1 209 IPR004843 GO:0016787
Aed4g1719 401 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 389 - -
Aed4g1719 401 SMART DBR1_2 215 347 IPR007708 GO:0006397|GO:0016788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1719 K18328 - gmx:100812726 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1719 4 21600661 21604692 Aed4g1719 4 21600661 21604692 ECH