Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1704 ATGGCTAGTGAACGTGATTTGTTCTCGGCGGAGATAGTGAACCGTGGAATAGAGTCGTCAGGACCGAACGCAGGGTCGTTGACCTTCTCGGTGAGGGTGAGGAGGCGTTTACCTGATTTTCTACAATCGGTGAACCTTAAGTACGTGAAATTGGGGTACCATTATCTCATAAACCATGGCATTTACTTGTTCACAATACCCATCCTTCTCGTGGTGTTTAGTGCTGAGGTTGGAAGTCTCAGCAAAGAGGACCTTTGGAAGAAGCTTTGGGAAGACGCGCGTTACGACCTTGCTACGGTTCTCGCTTCCTTTGGGGTCTTCGTTTTCACCTTATCCGTCTACTTCATGTCCAGGCCACGTCCCATTTACCTCATTGATTTTGCATGTTATAAACCCGATGATGAACTCAAGGTGTCAAGGGAGCAGTTGATGGAGGTAGGAAGGAAATCTGGGAAGTTCGACGAATCGAGTCTGGAGTTTCAGAAGAGGATGCTAATGTCCTCCGGCGTCGGCGACGAGACCTACATCCCGAAGGCCGTGATGTCCGGCAGCGCCGAGAACACCGCGACGATGAAGGAGGGTCGCGCGGAGGCCTCCATGGTGATGTTCGGTGCACTCGACGAGCTCTTCGAGAAAACCCGCGTCCGGCCAAAGGACGTGGGAGTCCTCGTGGTGAACTGCAGCATCTTCAACCCTACGCCGTCGCTGTCGGCGATGATCATAAACCACTACAAGATGAGGGGGAACATTCTGAGCTACAACCTCGGAGGAATGGGGTGCAGCGCGGGGATAATTGGCGTCGATTTGGCGAAGGATATTCTGCAGGCGAATCCGAATAACTATGCGGTGGTGGTGAGCACTGAGATGGTAGGGTTCAACTGGTACCAGGGTAAGGATAGGTCTATGCTTATTCCCAACTGCTTCTTCCGCATGGGCTGCTCCGCCGTTCTGCTTTCCAACCGTCGCAGAGACTATAGCCGCTCCAAGTACCGTCTTGAACACATTGTTCGCACCCACAAGGGCGCCGATGACCGCAGCTTCAGGTGTGTGTACCAAGAGGAAGATGAGCAAAAAATGAAGGGACTAAAGATAAGCAAAGACTTAATTGAGATTGGTGGTGATGCTCTGAAGACCAACATCACCACACTAGGACCCTTGGTGCTACCCTTTTCAGAGCAGCTTCTCTTCTTTGGAACACTTGTGTGGAGGCACTTATTTGGCAGCAACAAAAACAATGATGGAAGCTCACCCTCAATGAAGAAGCCATACATTCCTGACTACAAACTAGCTTTTGAGCACTTCTGTGTGCATGCTGCAAGCAAGACCATTCTTGATGAGCTCCAAAGGAACTTGGAACTGAGTGACAAGAACATGGAGGCTTCTAGGATGACACTGCACCGCTTCGGAAATACCTCCAGCAGCAGCATTTGGTATGAGTTGGCTTACATGGAAGCTAAAGAGAGTGTGAGAAGAGGAGACCGTGTTTGGCAACTTGCTTTTGGCTCTGGCTTCAAGTGCAACAGTGTTGTGTGGCGTGCCATGCGCCGTGTCAACAAACCCTCTAGGAACCCTTGGCTTGATTGCATCAACAGATACCCTGCAACTCTCAACAACTGA 1617 0.5065 MASERDLFSAEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLFTIPILLVVFSAEVGSLSKEDLWKKLWEDARYDLATVLASFGVFVFTLSVYFMSRPRPIYLIDFACYKPDDELKVSREQLMEVGRKSGKFDESSLEFQKRMLMSSGVGDETYIPKAVMSGSAENTATMKEGRAEASMVMFGALDELFEKTRVRPKDVGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIGVDLAKDILQANPNNYAVVVSTEMVGFNWYQGKDRSMLIPNCFFRMGCSAVLLSNRRRDYSRSKYRLEHIVRTHKGADDRSFRCVYQEEDEQKMKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLVWRHLFGSNKNNDGSSPSMKKPYIPDYKLAFEHFCVHAASKTILDELQRNLELSDKNMEASRMTLHRFGNTSSSSIWYELAYMEAKESVRRGDRVWQLAFGSGFKCNSVVWRAMRRVNKPSRNPWLDCINRYPATLNN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1704 538 PANTHER 3-KETOACYL-COA SYNTHASE 10 4 534 - -
Aed4g1704 538 Pfam FAE1/Type III polyketide synthase-like protein 114 404 IPR013601 GO:0006633|GO:0016020|GO:0016747
Aed4g1704 538 Coils Coil 444 464 - -
Aed4g1704 538 PANTHER 3-KETOACYL-COA SYNTHASE 4 534 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed4g1704 538 PIRSF Very_long_ch_3-ktacl-CoA_syn 39 538 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed4g1704 538 SUPERFAMILY Thiolase-like 333 513 IPR016039 GO:0016746
Aed4g1704 538 Gene3D - 125 513 IPR016039 GO:0016746
Aed4g1704 538 SUPERFAMILY Thiolase-like 108 327 IPR016039 GO:0016746
Aed4g1704 538 CDD CHS_like 98 511 - -
Aed4g1704 538 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 432 512 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1704 Aed-Chr4 21504850 21509698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1704 2 536 Miscellaneous Gene Families AT2G26250 75.362 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1704 K15397 - gmx:100778487 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1704 4 21504850 21509698 Aed4g1704 4 21504850 21509698 ECH