Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1701 AATAAGATTCGCTTTATTGCTTTTACTGTTGTTGTCTTCTACGCTGTGGTGGGTGTGTGTGTGTCACACTGTGAATCTGCGGTTCTTTCTTCGAATCAGCGTGAGCGTTGTGCGTTGACTATGGCAGCTGAAGATAAGTGGTGCGTGGTGACCGGAGGTCGGGGTTTCGCGGCTCGGCATTTAGTGGAAATGCTAATCCGTCACAACGAGTACTGCGTTCGCATTGCCGATTTGGAAGCTAGCATTGTGCTCGAGCCCGCCGAGCAGCTGGGGCTTCTCGGCCAGGCCTTGCACTCCGGCCGGGCCCGGTATGTCTCCCTCGATCTTCGCAACAAGGCCCAAGTTCTCAAAGCATTGGAGGGAGTTGAGGTGGTGTTCCACATGGCTGCTCCGAACTCATCCATTAATAACTACCAGCTTCATCATTCCGTCAATGTGCAAGGGACGAAGAATGTCATCGATGCTTGCGTGGAGCTCAACGTGAAGCGTCTTGTTTACACCAGCTCTCCCAGCGTCGTCTTTGATGGCGTTCATGGAATTCATAATGGAAGCGAAACAATGCCTTATGCGCATTCGCCTAATGATCATTATTCAGCGACGAAAGCCGATGGTGAAAAATTGGTTATTAAAGCTAATGGGACTAACGGGCTCCTAACGTGCTGCATTCGCCCTAGTAGCATTTTTGGGCCTGGTGATAGACTGTTGGTGCCTTCACTAGTTGATGCTGCCAGGAAAGGGAAATCCAAGTTTCTTCTTGGTGATGGCAATAACGTTTATGATTTCACATATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGATCGAGCTCTAGCTTCAGAAGGGCCAGTTTCAGAAAAAGCTGCAGGAGAGGCATATTTCATAACAAATATGGAGCCAATGAAATTCTGGGAGTTCGTGTCAGTGGTAGTGGAAGGTCTTGGATATGAAAGGCCAAGAATAAAGATCCCTACCTTTGTTATCATGCCCATTGCACATTTGGTGGAGTGGATATATAAGCTGCTAGGCCCATATGGGATGAAGGTGCCTCAGTTAACCCCTTCAAGAATTAGACTCACGACTTGCAGCAGAACTTTTGATTGCTCAAAAGCAAAGGATCGCCTTGGCTATGCACCCATCGTAAAACTACAGGAGGGTCTGCAGAGGACAATTGAATCATACACACACTTGAAGGCTGAAAATAAACCTAAAACTAAAAGAGAAGGTCCCTCAAAAGCTTCCAAATATCTTGGAAGTGGAAAAGTTGCCGACACATTGCTTTGGAAGGATAAAAAGCAAACTTTCATTGCACTGTTAGTCTTGATTGCAATATACTTCAACTTCATTGCATCAGAAAATACCATCATTAGTGCTCTGACAAAGCTTCTATTGTTCGCATCGATCCTTTTGTTCATTCATAGCATTCTACCTGCAAAAATATTGGGATATACTCTTGAGAAAATGCCCAAATCATGGTTTCAGTTATCAGAAGATATGTCACATCAAATTGCTCTCTCAGTGGCCTCATCATGGAATATTGCTGTGAATGTTTTGAAATCCCTTGCAGAAGGGAATGATTGGGTGCTGTTCTTCAAGGCTGTTCTCTCTCTGATTATTCTCAGCTTCCTTGGAGCCTTTTCACTGCAGAGTTTGTATACTATAGGAGCTACCTTGGCGTTTATTGCTTTCTACATATACGAACAGAGGGAGGAAGACATCGATGGCTTATTTATCAAAACACATTCTTTTGGATGCAAATTGAAATCTGATCTCACCAAGAAGTTTCTTTCTTCAAAGAAGGTTGATTGA 1809 0.4444 NKIRFIAFTVVVFYAVVGVCVSHCESAVLSSNQRERCALTMAAEDKWCVVTGGRGFAARHLVEMLIRHNEYCVRIADLEASIVLEPAEQLGLLGQALHSGRARYVSLDLRNKAQVLKALEGVEVVFHMAAPNSSINNYQLHHSVNVQGTKNVIDACVELNVKRLVYTSSPSVVFDGVHGIHNGSETMPYAHSPNDHYSATKADGEKLVIKANGTNGLLTCCIRPSSIFGPGDRLLVPSLVDAARKGKSKFLLGDGNNVYDFTYVENVAHAHICADRALASEGPVSEKAAGEAYFITNMEPMKFWEFVSVVVEGLGYERPRIKIPTFVIMPIAHLVEWIYKLLGPYGMKVPQLTPSRIRLTTCSRTFDCSKAKDRLGYAPIVKLQEGLQRTIESYTHLKAENKPKTKREGPSKASKYLGSGKVADTLLWKDKKQTFIALLVLIAIYFNFIASENTIISALTKLLLFASILLFIHSILPAKILGYTLEKMPKSWFQLSEDMSHQIALSVASSWNIAVNVLKSLAEGNDWVLFFKAVLSLIILSFLGAFSLQSLYTIGATLAFIAFYIYEQREEDIDGLFIKTHSFGCKLKSDLTKKFLSSKKVD 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1701 602 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 43 427 - -
Aed4g1701 602 Pfam Reticulon 422 577 IPR003388 -
Aed4g1701 602 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 49 323 IPR002225 GO:0003854|GO:0006694|GO:0016616
Aed4g1701 602 ProSiteProfiles Reticulon domain profile. 422 574 IPR003388 -
Aed4g1701 602 Gene3D - 37 399 - -
Aed4g1701 602 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 43 427 - -
Aed4g1701 602 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 395 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1701 Aed-Chr4 21465345 21471725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1701 49 411 Lipid Metabolism Gene Families AT2G33630 30.971 2.59e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1701 K23558 - gmx:100816854 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1701 4 21465345 21471725 Aed4g1701 4 21465345 21471725 ECH