Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1696 ATGAACATATCCAAGAAAGGACCCCTAACGGATGCAAAGCTATTAAGCCCAAACAAGGCAACAACTCTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTGCTCTCAGATCATCCTCATTATCTGGAACTACCAGCTCGGTAGATGCAACAACAAGGCTTACTGCTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATAGATCTGAATCATCCATTTCAAATAATTCTGATGACGAGGTGCACCAATACTGGCGATGTCAGCTCCCCGATGATATTACCCCTGATTTCAAGGTCATGGGAGAAGATGAGTCTCGAGGGCTTGATGATCTTTCTTTGGCAGGTTTATCCATACTTGATGACAATGAAGCCTCTAGGTTTCCTTCTTCTAAAGGAAGTAAATATATAATAAATGAGCCAGAGGAAATATCTCAGCAGCATATTAATGGCAATAGCCTTTCCAATTCAAGCTACAGGGAGGACCCATCTCCTGGAAGCTTTTTGAATGCTCTGGCAAAGCCTTGGGAGAGGCCAATTGGGAGTGCTGACCAGCGCATTAGCAGTGGTCAAGAGGGCCTTACTTATGATGACAACTCTAGACATGGATACTTAAATGATGTTTTAGCTGAAAATGCAATTGTGGATGATACTGATTTGAATCCTTTGGAGTTTTTAGCTTCTCTGTTTCCTGGTTTTGCAGCAGAAAGCCTTGCAGAAGCTTACTTTGCTAATGGTTGTGATTTACATCTGACCACTGAGATGCTCAGTCAGTTAGAGCTTCAAGTTGACAGTGGTTTCAATCAGAATCTGAATTCAAAGACTCTGTCAGCTCCCAATCTCAGTGCAATGGACTTCCCTACACTTACTTCACCAGATGGCCAGACTGCTTCAGTAAAATATGTGGTAGATAATGTCCAACAAAGTGGCAATCCTTACCGATCATTTGACAGTGATGTGCTGCTTTTCAAATCTGGTTCTTCAGTTCCATCTAGGGGTGCTAGTGACTTTGCTTCAGCTGTCAGGAAGTTGGCTTCTCAGGATTCTGGTGGTATTTGGAAGTATGACAAAAATGGCTCTAGCGATGCTGCTATTGGCTCAAGTAGGAATTCAAATGTCCTGGCTAGTGGTTACAATGGTGGACAGGGGAGAGCACACTTTGGTGATCGATTACTGAACCGTGGTTCAGCTCGGGCAACTACTGTTTGGCTTGAAACCGGTGATGCAGTTGCAAATATGTATTCAGAACTGCGGGAAGAGGCTCGTGATCATGCATGCTTACGTAATGCATATTTTGAGCAGGCACAGCAAGCCTATCTTATTGGTAATAAAGCCCTAGCAAAGGAACTAAGTGCTAAAGGGCAACTGCACAACATGCATGTGAAGGCTGCTCAGGGAAAAGCTCAAGAGTCCATTTACCGCCAGAGAAATCCAGTTGCTCCAGAGATGCAGGGCAATGGAAGAGGAACCGAGAGGATAATAGACCTACACGGGTTGCATGCGAGTGAAGCCATTCATGTGCTGAAACATGAGTTGAGTGTGCTTAAAAGCACTGCCATAGCTGCTGAGCAGCGTTTGCAGGTTTATATTCTTGTGGGCACAGGTCATCATACCAGGGGTTCTCGCACTCCGGCCAGACTTCCAATAGCTGTACAGCGTTTTCTTCTTGAAGAGGGCATTGACTTCACGGAAACTCAACCAGGCCTACTTCGTGTTGTGATATATTGA 1719 0.4462 MNISKKGPLTDAKLLSPNKATTLNPNAAEFVPFALRSSSLSGTTSSVDATTRLTAAGALGKAVLDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVMGEDESRGLDDLSLAGLSILDDNEASRFPSSKGSKYIINEPEEISQQHINGNSLSNSSYREDPSPGSFLNALAKPWERPIGSADQRISSGQEGLTYDDNSRHGYLNDVLAENAIVDDTDLNPLEFLASLFPGFAAESLAEAYFANGCDLHLTTEMLSQLELQVDSGFNQNLNSKTLSAPNLSAMDFPTLTSPDGQTASVKYVVDNVQQSGNPYRSFDSDVLLFKSGSSVPSRGASDFASAVRKLASQDSGGIWKYDKNGSSDAAIGSSRNSNVLASGYNGGQGRAHFGDRLLNRGSARATTVWLETGDAVANMYSELREEARDHACLRNAYFEQAQQAYLIGNKALAKELSAKGQLHNMHVKAAQGKAQESIYRQRNPVAPEMQGNGRGTERIIDLHGLHASEAIHVLKHELSVLKSTAIAAEQRLQVYILVGTGHHTRGSRTPARLPIAVQRFLLEEGIDFTETQPGLLRVVIY 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1696 572 SUPERFAMILY SMR domain-like 489 570 IPR036063 -
Aed4g1696 572 CDD CUE_CID7_like 217 259 IPR041806 -
Aed4g1696 572 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 572 - -
Aed4g1696 572 SMART SMR_2 488 572 IPR002625 -
Aed4g1696 572 ProSiteProfiles Smr domain profile. 491 572 IPR002625 -
Aed4g1696 572 Pfam Domain of unknown function (DUF1771) 411 474 IPR013899 -
Aed4g1696 572 Gene3D - 458 571 IPR036063 -
Aed4g1696 572 SMART DUF1771_2 410 475 IPR013899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1696 Aed-Chr4 21414336 21419727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1696 - - gmx:100814198 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1696 4 21414336 21419727 Aed4g1696 4 21414336 21419727 ECH