LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g1692	TTTCGCTTCATACTTCACTCTTCACACTTAACGTATCCGCCAAATCTAGGGGCATATTCCACCACCACTTCTCTGCAAAAGAGACCCTTTTGCTTCTTTTCAGATTCTCTTTCTGGTGTAAAGTTTGATGATGGGGTGGTTGTACCCTGCATGCTCTTGCTTTTTCATGAAAATATGGGCCTAGTCTGTAGCAGAAGTCGTCGTTTTCGTGATGCTGATGCTGAAGAAAATGCTCAGGATGCAGAAATTGAAAGAAGAATCGAGTTAGAAACAAAGGCTGAAAAGCATATTCAGAAACTTCTACTACTAGGTGTGCTGGAGAGTCTGGGAAGTCTACAATCTTTAAGCAGGCAAGAAATTGCATCTTCTCAACAGCTTATAAAACTTTTATTTCAAACTGGCTTTGACGAGGCTGAGCTAAAAAGCTACATACCAGTCATTCATGCTAATGTGTATCAGACAATAAAAGTACTGCATGATGGATCAAAAGAGTTGGTGCAGAATGACGTTGATTCTTCAAAGTATGTGATATCTAATGAAAACCAGGTAGTTCACTGTTACCACCTCTTTTATGGTCTGGACATTGGTGAAAAGCTCTCAGAAATTGGAGGCAGGCTGGATTACCCATGTCTTACGAAGGAGCTTGCACGGGAAATAGAGACTCTGTGGGAGGATGCTGCAATTCAGGTGGCCAGATTGCACGCTTTGATTGAAACATACGCCCGTGGTAATGAACTCCAAGTTCCAGATTGTGCCCATTATTTCATGGAAAATTTGGAGAGGCTGTCTGATGCAAATTATGTTCCAACAAAGGAGGATGTTTTGAATGCAAGAGTTCGTACAACTGGTGTTGTTGAGATCCAATTCAGCCCTGTTGGAGAAAATAAGAGAAGTGGCGAAGTCTATAGACTCTTTGATGTTGGTGGTCAGAGAAATGAGAGGAGAAAATGGATCCATCTTTTTGAAGGAGTTACAGCTGTAATATTCTGTGCTGCAATTAGCGAGTATGATCAAACACTTTATGAGGATGAAAACAAGAACAGAATGATGGAGACCAAGGAACTCTTCGAGTGGGTGCTGAAGCAACCATGTTTTGAGAAAACATCCTTCATGTTATTTTTAAACAAGTTTGACATATTTGAAAAGAAGATCCTGAAAGTTCCGCTCAATGTATGTGAGTGGTTCAAAGATTACCAGCCAGTTTCAACAGGGAAACAAGAGATCGAACACGCATATGAGTTTGTGAAGAAAAAGTTTGAGGAACTGTATTTCCAGAGCACAGCTCCTGACCGTGTAGATCGCGTGTTCAAGATCTATCGGACGACAGCCCTTGATCAGAAGCTTGTGAAGAAGACTTTCAAGCTTGTTGATGAGACTTTGAGACGGAGGAATCTCTTTGAAGCTGGCTTATTATGA	1416	0.4117	FRFILHSSHLTYPPNLGAYSTTTSLQKRPFCFFSDSLSGVKFDDGVVVPCMLLLFHENMGLVCSRSRRFRDADAEENAQDAEIERRIELETKAEKHIQKLLLLGVLESLGSLQSLSRQEIASSQQLIKLLFQTGFDEAELKSYIPVIHANVYQTIKVLHDGSKELVQNDVDSSKYVISNENQVVHCYHLFYGLDIGEKLSEIGGRLDYPCLTKELAREIETLWEDAAIQVARLHALIETYARGNELQVPDCAHYFMENLERLSDANYVPTKEDVLNARVRTTGVVEIQFSPVGENKRSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLYEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSTGKQEIEHAYEFVKKKFEELYFQSTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDETLRRRNLFEAGLL	471

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g1692	471	PANTHER	GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT	59	471	IPR002976	GO:0001664\|GO:0003924\|GO:0005834\|GO:0007188\|GO:0031683
	Aed4g1692	471	ProSiteProfiles	G-alpha domain profile.	96	471	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Aed4g1692	471	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	274	468	IPR027417	-
	Aed4g1692	471	PRINTS	Plant G protein alpha subunit signature	423	435	IPR002976	GO:0001664\|GO:0003924\|GO:0005834\|GO:0007188\|GO:0031683
	Aed4g1692	471	PRINTS	Plant G protein alpha subunit signature	85	94	IPR002976	GO:0001664\|GO:0003924\|GO:0005834\|GO:0007188\|GO:0031683
	Aed4g1692	471	SMART	galpha_1	77	470	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Aed4g1692	471	PANTHER	GTP-BINDING PROTEIN ALPHA SUBUNIT	59	471	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Aed4g1692	471	Gene3D	-	127	459	IPR027417	-
	Aed4g1692	471	SUPERFAMILY	Transducin (alpha subunit), insertion domain	135	281	IPR011025	GO:0007165
	Aed4g1692	471	CDD	G-alpha	127	465	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Aed4g1692	471	Gene3D	-	136	280	IPR011025	GO:0007165
	Aed4g1692	471	Pfam	G-protein alpha subunit	80	459	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Aed4g1692	471	PRINTS	Alpha G protein (transducin) signature	99	114	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Aed4g1692	471	PRINTS	Alpha G protein (transducin) signature	370	379	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Aed4g1692	471	PRINTS	Alpha G protein (transducin) signature	267	289	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Aed4g1692	471	PRINTS	Alpha G protein (transducin) signature	324	352	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Aed4g1692	471	PRINTS	Alpha G protein (transducin) signature	302	319	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g1692	Aed-Chr4	21388766	21393529	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g1692	K19729		-	gmx:100800120	698.738

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g1692	4	21388766	21393529	Aed4g1692	4	21388766	21393529	ECH