Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1683 ATGGAGAGGCTTTCGCCGAACCGTCGTCGTTTTGACGGAGAGAGTAGTTCTGCTTCCGCCGAGGACACTCGCCGGAAGCGCGCCAGAGTTTACTTTGATTTTGATGGCACTCACTGTACAATTGTGAGGTCTTCTCATGCTGGGAAATCCAATGCATCTGTTGGAGAATGTGGGGATTATGATAATTTTCCAGGATCGTCTCTTCGATCCAACGATGATGCTTTGAGGATGATGTCTGCTGCTGAGGAGAATAACTTTGATGAAGGAGATGACAGTGACTTCTCTACAACAGTCGATGATCTAGACGTCAAGATGGATCTTACCGATGACTTACTGCATATGGTTTTCTCGTTTTTGGATCATCCCAATCTATGCAAAGCTGCTAGAGTTTGTAAGCAGTGGCGGTCTGCTAGTGCTCATGAAGACTTCTGGAAGAGTTTGAATTTCGAAGATCGGAACATAACTGCAGAGCAATTTGAGGACATCTGTAGGCGTTATCCTAATATCACATCGATCTGCATGTCTGGTCCTGCCTCTAACCAGCTTGTGATGAAGGCCATCTCTTCGTTAAGAAATCTCGAGGCTTTAACATTGGGAAGATCACATATAATGGATAATTTTTTCCAAGCTTTGGCCGATTGTTCTATGTTGAGAAGACTGAGCATTAATGATGCTATACTTGGCAGTGGTATTCAGGAGATATCAATTAATCATGACAGGCTGTGTCATCTCCAAATGACAAAATGCCGTGTGATGCGAATAGCAGTCAGGTGCCCACAACTTGAAACTATGTCATTGAAGCGCAGTAGCATGGCACAGACTGTGCTCCATTGCCCCGTTTTGCAAGAGCTTGATATAGGCTCTTGCCACAAACTTCCTGATTCCGCTATTCGTTCAGCTGTTACATCATGCCCGCAATTAGTTTCTTTGGACATGTCTAATTGTTCAAGTGTTAGTGATGAAACATTAAGGGAAATATCCCAGAATTGTGCTAACCTTACTTTTCTTGATGCATCCTACTGTCCAAACGTATCCTTGGAGACTGTTAGACTGCCAATGCTAACAGTTCTGAAGCTTCACAGTTGTGATGGCATCACTTCAGCCTCAATGGCCGCAATATCTTACAGTGATATGTTGGAGGTTTTGGAGCTTGATAATTGTAGTCTATTGACGTCAGTGTCTTTAGATCTTCCGCGCCTGCAGAATATTAGATTGGTACATTGTCGCAAATTTGCTGATTTGAACTTGATGACCCTAATGCTGTCTTCTATTTTGGTGTCCAATTGCCCTGTGCTCCATCATATCAACATCACTTCAAATTCACTTCAAAAATTAATAATACCAAAGCAGGACAGCTTAACCACATTAGCACTTCAATGCCAATCTTTACAAGAAGTGGATCTCTCTGAGTGTGAATCTTTGAATAACTCTATATGCAATGTTTTTAATGATGGTGGAGGATGCCCCATGTTGAAATCATTAGTTCTTGATAATTGTGAGAGTTTGACATCAGTTCAATTCATCAGTACCTCTTTAATCAGTCTTTCCCTTGGTGGTTGCCGGGCAATAACTGATCTAGATCTCACATGCCCTAATCTTGAGAAAGTTATTTTGGATGGCTGTGATCATTTGGAAAGAGCATCATTTTCTCCAGTTGGTCTTTCATCTCTCAATTTAGGAATATGTCCAAAATTGAGCACACTCAGCATTGAAGCCCCGTTTATGGTTTCACTTGAGTTGAAAGGATGCGGTGTACTATCTGAAGCATTCATTAATTGTCCACTCTTAACATCTCTTGATGCTTCCTTTTGCAGCCAACTAACGGATGGCTGCTTGTCCGCAACAACTGTCTTATGCCCACTAATTGAATCATTGATATTAATGTCATGCTCGTTGATTGGTTCAGATGGTCTTCGATCTCTGTGTTGTCTTCCAAATTTGTCTGTTCTTGACTTATCATACACTTTCTTGGTGAACTTGCAGCCAGTTTTTGATTCTTGTTTACAACTAAAGGTTTTAAAGCTGCAAGCATGCAAATATCTCACTGACACATCACTTGAACCTCTTTACAAAGGAGGTGCTTTACCAGCACTTCAGGAGTTAGACTTGTCTTATGGAACTCTCTGTCAGTCGGCCATAGATGAGCTTCTTGCTTGCTGCACAAACCTCACTCATGTGAGCTTGAATGGCTGTGTGAATATGCATGATTTGAATTGGGGAAGCAGTCATGGGCGGAGTGACAATTTCCTTGCTGTTAACACCCCATCCAGGGCATTTTCTAATGAGAATATCCCTGAATCAAGTGAGCAATCCACTCGCTTGCTGCAAAACCTCAACTGTGTTGGATGTCCAAATATTAGGAAGGTTGTCATTCCATTTAGGGCAAATTGTTGTCATTTGTTTTTTTTAAACCTTTCGCTCTCGGCAAATTTGAAAGAGTCTTGCAATATTGATGAGGAAGCTGTTGAAGCTGCAATATCAAAATGCAGTATGCTGGAGACTCTTGATGTTCGCTTTTGTCCAAAGCTCAATGAGCATGGGAAGATTACGCACAATTTGTTCAAGTTTGAAGCGTATATTCAGCAGTTAGTCAACTTTGTTACCTTGATCATGGATATAAAAAAATTTCCTAGTGTTTCCAATCACTTGGATACAAAGCGCGCTTGGTAA 2670 0.4142 MERLSPNRRRFDGESSSASAEDTRRKRARVYFDFDGTHCTIVRSSHAGKSNASVGECGDYDNFPGSSLRSNDDALRMMSAAEENNFDEGDDSDFSTTVDDLDVKMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRSASAHEDFWKSLNFEDRNITAEQFEDICRRYPNITSICMSGPASNQLVMKAISSLRNLEALTLGRSHIMDNFFQALADCSMLRRLSINDAILGSGIQEISINHDRLCHLQMTKCRVMRIAVRCPQLETMSLKRSSMAQTVLHCPVLQELDIGSCHKLPDSAIRSAVTSCPQLVSLDMSNCSSVSDETLREISQNCANLTFLDASYCPNVSLETVRLPMLTVLKLHSCDGITSASMAAISYSDMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFADLNLMTLMLSSILVSNCPVLHHINITSNSLQKLIIPKQDSLTTLALQCQSLQEVDLSECESLNNSICNVFNDGGGCPMLKSLVLDNCESLTSVQFISTSLISLSLGGCRAITDLDLTCPNLEKVILDGCDHLERASFSPVGLSSLNLGICPKLSTLSIEAPFMVSLELKGCGVLSEAFINCPLLTSLDASFCSQLTDGCLSATTVLCPLIESLILMSCSLIGSDGLRSLCCLPNLSVLDLSYTFLVNLQPVFDSCLQLKVLKLQACKYLTDTSLEPLYKGGALPALQELDLSYGTLCQSAIDELLACCTNLTHVSLNGCVNMHDLNWGSSHGRSDNFLAVNTPSRAFSNENIPESSEQSTRLLQNLNCVGCPNIRKVVIPFRANCCHLFFLNLSLSANLKESCNIDEEAVEAAISKCSMLETLDVRFCPKLNEHGKITHNLFKFEAYIQQLVNFVTLIMDIKKFPSVSNHLDTKRAW 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1683 889 Gene3D Ribonuclease Inhibitor 661 847 IPR032675 -
Aed4g1683 889 PANTHER OS10G0396666 PROTEIN 20 844 IPR044703 GO:0010252|GO:1905393
Aed4g1683 889 Gene3D - 103 145 - -
Aed4g1683 889 PANTHER OS10G0396666 PROTEIN 20 844 - -
Aed4g1683 889 SMART LRR_CC_2 397 422 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 720 753 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 667 692 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 460 484 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 829 852 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 619 644 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 593 618 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 304 329 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 278 303 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 530 555 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 488 518 IPR006553 -
Aed4g1683 889 SMART LRR_CC_2 351 376 IPR006553 -
Aed4g1683 889 SMART fbox_2 107 147 IPR001810 GO:0005515
Aed4g1683 889 MobiDBLite consensus disorder prediction 1 23 - -
Aed4g1683 889 ProSiteProfiles F-box domain profile. 101 147 IPR001810 GO:0005515
Aed4g1683 889 Gene3D Ribonuclease Inhibitor 420 566 IPR032675 -
Aed4g1683 889 Gene3D Ribonuclease Inhibitor 271 419 IPR032675 -
Aed4g1683 889 SUPERFAMILY L domain-like 425 605 - -
Aed4g1683 889 Gene3D Ribonuclease Inhibitor 146 270 IPR032675 -
Aed4g1683 889 SUPERFAMILY RNI-like 619 845 - -
Aed4g1683 889 Gene3D Ribonuclease Inhibitor 567 660 IPR032675 -
Aed4g1683 889 SUPERFAMILY RNI-like 147 442 - -
Aed4g1683 889 Pfam F-box-like 109 149 IPR001810 GO:0005515
Aed4g1683 889 SUPERFAMILY F-box domain 89 160 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1683 Aed-Chr4 21320600 21326427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1683 - - gmx:100786178 1474.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1683 4 21320600 21326427 Aed4g1683 4 21320600 21326427 ECH