Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1679 ATGACTTCTGCTTCTGCTCCCATGGCTATGTCACTGAGCTCTGTTACCAAGACCAACAAGCCTTCATCCGAAGCCTTCTTCAGGCCACTACCACTAAGACAACCAAAGAGAACCCTCCTCCACTTTACAAATTCCAAGGTTCAAGTCAATGCATCTTTGAAGGAGAAGGCAGTGGCAGCAGCTACTGTGACAGCATCTATGGTGGTTCCGGAGGTGGCTCATGCTGCTGCATACGATTTCTCCCCATCTCTCAAGAACTTTCTACTGAGCATCTTCGCTGGTGGGGTTGTTCTAGCTGCCATACTTGCAGCCGTTCTTGGGGTTTCCAACTTTGATCCCGTTAAGAGAACTTAA 354 0.4859 MTSASAPMAMSLSSVTKTNKPSSEAFFRPLPLRQPKRTLLHFTNSKVQVNASLKEKAVAAATVTASMVVPEVAHAAAYDFSPSLKNFLLSIFAGGVVLAAILAAVLGVSNFDPVKRT 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1679 117 Gene3D Single helix bin 80 117 - -
Aed4g1679 117 PANTHER OS07G0673550 PROTEIN 2 117 - -
Aed4g1679 117 Pfam Photosystem II reaction centre X protein (PsbX) 81 116 IPR009518 GO:0009523|GO:0015979|GO:0016020
Aed4g1679 117 MobiDBLite consensus disorder prediction 1 28 - -
Aed4g1679 117 MobiDBLite consensus disorder prediction 1 23 - -
Aed4g1679 117 PANTHER OS07G0673550 PROTEIN 2 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1679 Aed-Chr4 21297160 21297513 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1679 - - gmx:100305487 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1679 4 21297160 21297513 Aed4g1679 4 21297160 21297513 ECH