Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1675 ATGAAAGCATCCACACTATCAATATCGTCGCTGCTTAACTTGAAATCTTTCAATCTCCACCACCACCACCGCTCTCCTCCCACTTCCAACCCCTTCTTCCTTCGCTCTCTCTCTCGCTTTCCCTCCTCCAATCCCCGCCATTCTCCAGTCATGGCCGCCGCATCCTTGCACTCCGAACAAGCCCGCGCCCCTCCCGCCATTCCCTTGCCCCCTCCCCCTCTCTCCAAGGCAAGCTCACTCTCTCTATCTCTTTCTTCCACTAACGCCTTCATAATCGGGCTCTGTCAACTCTCCGTCACCCCCGACAAAGACAGGAACATCGCCCACGCCCGAACCGCCATTCAGGATGCTGCATCCAAGGGAGCCCAGCTCGTTCTTTTGCCCGAAATTTGGAACAGTCCTTATTCCAATGACAGTTTCCCCGTCTACGCTGAGGATATTGACGCTGGTGCTTCTCCTTCCATTTCCATGCTATCCGAACTCTCTCGTCTCTTGAAAATCACCATCGTTGGTGGTTCAATTCCAGAACGTTCTGGAGGTCGCTTGTACAATACTTGTTGCGTCTTTGGCTCCGACGGAAGCCTACTAGCCAAGCACCGCAAGATACATCTTTTTGATATTGACATCCCTGGAAAGATTACTTTCATTGAATCTAAAACTCTTACTGCTGGGGAGACTCCCACAATTGTCGACACAGAGGTTGGACGCATTGGCATAGGCATCTGTTATGACATTCGATTTCCAGAACTAGCAATGATATATGCTGCTAGAGGTGCTCACTTACTCTGCTATCCCGGGGCATTTAACATGACAACTGGACCATTACATTGGGAGTTATTGCAGAGGGCAAGGGCCACAGATAATCAGTTATATGTGGCTACCTGTTCACCTGCCCGGGATACTGGATCTGGTTATGTAGCTTGGGGCCACTCCACTCTTGTTGGACCATTTGGAGAGGTTCTGGCTACTACAGAACATGAGGAGGCAATCATCATAGCAGAAATTGATTATTCAATATTGGAGCAGAGAAGGACAAATCTCCCTGTAACTAAGCAAAGACGAGGTGATCTTTACCAGTTGGTGGATTTTCAGAGGCTGAATTCCCAGTGA 1110 0.4937 MKASTLSISSLLNLKSFNLHHHHRSPPTSNPFFLRSLSRFPSSNPRHSPVMAAASLHSEQARAPPAIPLPPPPLSKASSLSLSLSSTNAFIIGLCQLSVTPDKDRNIAHARTAIQDAASKGAQLVLLPEIWNSPYSNDSFPVYAEDIDAGASPSISMLSELSRLLKITIVGGSIPERSGGRLYNTCCVFGSDGSLLAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTGSGYVAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSILEQRRTNLPVTKQRRGDLYQLVDFQRLNSQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1675 369 Pfam Carbon-nitrogen hydrolase 93 340 IPR003010 GO:0006807
Aed4g1675 369 Gene3D - 89 363 IPR036526 -
Aed4g1675 369 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 90 337 IPR003010 GO:0006807
Aed4g1675 369 ProSitePatterns Uncharacterized protein family UPF0012 signature. 238 258 IPR001110 -
Aed4g1675 369 PANTHER OMEGA-AMIDASE, CHLOROPLASTIC-LIKE 42 368 - -
Aed4g1675 369 SUPERFAMILY Carbon-nitrogen hydrolase 85 354 IPR036526 -
Aed4g1675 369 PANTHER NITRILASE-RELATED 42 368 - -
Aed4g1675 369 CDD nit 92 354 IPR045254 GO:0016811
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1675 Aed-Chr4 21263710 21268177 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1675 K13566 - gmx:100817195 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1675 4 21263710 21268177 Aed4g1675 4 21263710 21268177 ECH