Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1668 ATGAAGACGACGAAGAAGAGTGGCGAAGGAAATGGTGGGAAGTTCAAGGGCGCGGCGGCGGAGAGGTCAGCGTACTTCGCACGCAGAGAAGCAGCGAAGGTATTGAAAGTGGTTCTCGAAGGAGACGCTAAGCGCCGCGCTCTTGCTTCCATCAAATCCCTCATTTATCAACCTTCCGTTAGAAACAAGAAGGCCACATTCGCTCTCATTTGCCAAACCCTCAAACATCTTCCTGTCATCAAGGACGTTTTGGAAGCTGCTTCTATTCTCAACACCAAGTGGAAGAGGCAGGGAGAATTGGTTTATATCATTGTATATGATATCCTTTTCGGCAAGGCGGTTTCACTCGTTGGTGATGCAGAGAAGTACCTTATGCGCCGCCAAGATGCCCTGCATGTTTCTGTACCTCGATGTGTTCGTGTGAATACACTTAAGTTGGATGTTGATTCTGCATTACTTGAACTTCAGAAAAAATACTCGGTTGAAAAGGATAATTTACTGCCTGACTTGCTGATACTCCCACCAGGAACTGATTTACACGATCATCCTCTTGTCAAGAATGGAAGTATCTTTATGCAAGGTAAGGCAAGTTCCATGGTTGCACCAGCCCTTAGCCCTGAACCAGGATGGGAGGTTATTGACGCATGTGCAGCACCGGGAAACAAAACTGTTCACCTTGCTGCCCTTATGAAGAGAAAGGGTAATATTATAGCATGTGAGCTGCAAAAGGAAAGGATTAAGCGTTTGAAGGACACTATAAAGCTATCTGGTGCTGCTAACATACAAGTCCTCAATGATGATTTCTTGAACCTAAATCCCAAGGATCCTTCATATTCCAAGGTGAAAGCTATTCTTTTGGATCCTTCCTGCTCTGGTTCTGGGACTGCTGCTTCAAGATTAGATCATCTGCTCCCATCTAAAGCAGCAGGTCAGGATACTGATATAGAAAGATTGAACAAGCTTGCAACTTTCCAGAGAAAGGCTCTTCAGCATGCTTTACTTTTTCCAGCTGTTGAAAGAATTGTGTATAGTACATGTTCAATCAACCAAATTGAGAATGAAGATGTCATAAAATCTGTTCTGCCCATAGCCGAATCAAATGGATTTCAATTGGCAAAGCCCTTCCCCGAGTGGCAATGCCGTGGTCTTCCAGTGTTTGAAGGCTCTGAATGCCTGGTTCGGACAGATCCTGCTAAACATGGCGAGGGTTTCTTCATTGCGTTGTTTACTAGGAAAGAGTCTGATTTGTCAGGGTGGTCAAATGAAATTAGAATTTCCCACAGCACTCCCAGAATTAAAAATCCGCAAAGAAAGAGGAAACGTGTACCGTTTGTTAGCACTAACCCATTCAAAATGTGGTTATTTGATAGTACAGTTGTCTGTGCGGCCGATTTGAAGGTATAA 1404 0.4416 MKTTKKSGEGNGGKFKGAAAERSAYFARREAAKVLKVVLEGDAKRRALASIKSLIYQPSVRNKKATFALICQTLKHLPVIKDVLEAASILNTKWKRQGELVYIIVYDILFGKAVSLVGDAEKYLMRRQDALHVSVPRCVRVNTLKLDVDSALLELQKKYSVEKDNLLPDLLILPPGTDLHDHPLVKNGSIFMQGKASSMVAPALSPEPGWEVIDACAAPGNKTVHLAALMKRKGNIIACELQKERIKRLKDTIKLSGAANIQVLNDDFLNLNPKDPSYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAGQDTDIERLNKLATFQRKALQHALLFPAVERIVYSTCSINQIENEDVIKSVLPIAESNGFQLAKPFPEWQCRGLPVFEGSECLVRTDPAKHGEGFFIALFTRKESDLSGWSNEIRISHSTPRIKNPQRKRKRVPFVSTNPFKMWLFDSTVVCAADLKV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1668 467 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 20 134 IPR023267 GO:0001510
Aed4g1668 467 PRINTS RNA (C5-cytosine) methyltransferase signature 282 294 IPR023267 GO:0001510
Aed4g1668 467 PRINTS RNA (C5-cytosine) methyltransferase signature 184 198 IPR023267 GO:0001510
Aed4g1668 467 PRINTS RNA (C5-cytosine) methyltransferase signature 394 411 IPR023267 GO:0001510
Aed4g1668 467 PRINTS RNA (C5-cytosine) methyltransferase signature 213 223 IPR023267 GO:0001510
Aed4g1668 467 PRINTS RNA (C5-cytosine) methyltransferase signature 338 354 IPR023267 GO:0001510
Aed4g1668 467 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 135 420 IPR023267 GO:0001510
Aed4g1668 467 Gene3D Sun protein; domain 3 153 192 - -
Aed4g1668 467 PANTHER BNAA09G04380D PROTEIN 135 420 - -
Aed4g1668 467 Gene3D Vaccinia Virus protein VP39 193 418 IPR029063 -
Aed4g1668 467 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 412 IPR029063 -
Aed4g1668 467 Pfam 16S rRNA methyltransferase RsmB/F 203 409 IPR001678 GO:0008168
Aed4g1668 467 PANTHER BNAA09G04380D PROTEIN 20 134 - -
Aed4g1668 467 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 127 412 IPR001678 GO:0008168
Aed4g1668 467 CDD AdoMet_MTases 212 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1668 Aed-Chr4 21237310 21241376 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1668 K15264 - gmx:100775620 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1668 4 21237310 21241376 Aed4g1668 4 21237310 21241376 ECH