Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1664 ATGGCGGATCCCTACTACTCTTACGGTGCTCCGGCCGCCGCTGACGGAGGATTGTTTTACAGTGCTGATGATACATTGGGCTCCAGAGTTCATTCTGAGCCTGTTAAGGGTTATTCACCTCTTGCAGATCCTGATCTGGTTAAAAAACGAGAGACGACGCCGTTGGGCATTAACCATGGTGTTCCTGATGTAAACAGTGAAAGACCAGCCTCTAAAAGCAGTTATGATGGTCTCCCAATTTCCGCAGCAGACTCAAACATTCTATTTGTGGGTGGACTTCCAAATGACTGCACTAGAAGGGAAGATATCAGAGTCGTTCACAAGGAGCCTAGACGTAGTGGAGACAAGGCTATGACTTTGTGTTTTGTGGAGTTTGATGACTCCAAATGTGCTATCACTGCTCTGGAAGCCCTGCAGGGATACAAGTTTGATGACAAAAAGCCTGACTCACCATCCTTAAAAATACAGTTTGCACACTTTCCTTTCCATCTACCATCTGATCCTGGCAACAGCTTATCAACATGA 525 0.461 MADPYYSYGAPAAADGGLFYSADDTLGSRVHSEPVKGYSPLADPDLVKKRETTPLGINHGVPDVNSERPASKSSYDGLPISAADSNILFVGGLPNDCTRREDIRVVHKEPRRSGDKAMTLCFVEFDDSKCAITALEALQGYKFDDKKPDSPSLKIQFAHFPFHLPSDPGNSLST 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1664 174 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 102 147 IPR000504 GO:0003723
Aed4g1664 174 Gene3D - 81 160 IPR012677 -
Aed4g1664 174 MobiDBLite consensus disorder prediction 53 73 - -
Aed4g1664 174 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 86 160 IPR000504 GO:0003723
Aed4g1664 174 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 20 165 - -
Aed4g1664 174 SUPERFAMILY RNA-binding domain, RBD 55 147 IPR035979 GO:0003676
Aed4g1664 174 PANTHER PROTEIN COUCH POTATO 20 165 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1664 - - gmx:100809186 306.219