Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1652 ATGGAGGAAGGGTACCCCAGAAGCAAGTTCAAGACCGTCTGCGTCTTCTGTGGCAGCAACAGTGGCAACCGACAAGTCTTTAGTGACGCTGCGATTCAATTGGGCAATGAACTGGTTAAGAGGAACATAGACTTGGTGTATGGTGGGGGCAGTGTTGGGCTGATGGGCTTAATATCTCAGAGAGTGTATGATGGAGGCTGCCATGTCCTAGGGATCATTCCAAAAGCTCTCATGCCTCTCGAGATATCTGGTGAAACAGTTGGTGAAGTAAGGATTGTTTCAGATATGCACGAACGAGGATATGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCACAACTTGGAATCCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGCTTCATTAAGCCTGGTGCACGGAATATAGTTGTCTCTGCTACGTCAGCCAAAGAACTTATGATGAAGATGGAGCACTACACTCCTTCGCACGAACATGTTGCCTCTCATGAGAGCTGGCAGATGAAGCAATTAGGTAATTATCCAGATGCAGAGTGA 594 0.4562 MEEGYPRSKFKTVCVFCGSNSGNRQVFSDAAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARNIVVSATSAKELMMKMEHYTPSHEHVASHESWQMKQLGNYPDAE 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1652 197 Pfam Possible lysine decarboxylase 100 169 IPR031100 -
Aed4g1652 197 Gene3D - 3 99 - -
Aed4g1652 197 SUPERFAMILY MCP/YpsA-like 9 172 - -
Aed4g1652 197 Gene3D - 100 188 - -
Aed4g1652 197 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 7 191 - -
Aed4g1652 197 PANTHER LOG FAMILY PROTEIN YJL055W 7 191 - -
Aed4g1652 197 Pfam SLOG cluster4 family 18 97 IPR041164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1652 Aed-Chr4 21122218 21125175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1652 K22522 - gmx:100785484 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1296 6 17766972 17769843 Aed4g1652 4 21122218 21125175 PCT