Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1650 ATGGATTCTTCACAAGGGTCTACCATTGCTGGTTTCGTGGACAAGGCATCCATTCAGAGGAATGAATCTAGCTTTGATGGCGTCCCTGTGTATGTCAAGGAACTAATTGCTGGAGGCTTTGCTGGTGCGCTTTCTAAGACCACTGTTGCACCCCTCGAACGGGTCAAGATACTTTGGCAGACAAGGACACCAGGATTTCATTCTCTTGGGGTGTATCAATCTTTGAATAAGATACTGAAGCATGAAGGTTTTCAAGGATTATACAAGGGAAATGGAGCTAGTGTTATCCGCATTGTTCCGTATGCAGCCTTGCATTTTATGACATATGAGCGCTACAAAAGTTGGATCCTGAATACTTATCCTGTGTTAGGTACGGGTCCTTTTATTGACCTTTTAGCAGGCTCTGCTGCAGGAGGAACTTCAGTGGCAGACACAAGAGGAAGTATCAAAGATGGTATGAAAGGAGTTCAACCTGCACATAATGGCATTAAAGGTGTGCTTACAAGTGTCTATAAGGAAGGGGGAGTTCGTGGACTTTATAGGGGTGCAGGACCAACCCTTACCGGAATTCTTCCATATGCTGGTTTAAAGTTCTACATGTATGAGAAATTGAAGACTCATGTTCCTGAAGAACATCAAAAGTCCATTATGATGCGTCTTTGTTGTGGAGCTCTAGCTGGATTGTTTGGGCAGACTTTAACATACCCTTTAGATGTTGTCAAGAGACAGATGCAGGTTGGCAGCCTGCAAAATGCTGCTCATGAGGATGCCAGATACAAAAATACAATTGACGGACTTAGGACAATTGTTCGTAATCAAGGATGGAGGCAGCTGTTTCATGGCGTAAGCATCAACTATATAAGGATTGTTCCTTCAGCTGCAATTAGTTTCACCACATACGACATGGTGAAGTCCAAGCTTGGCATACCACCTCAACAAAAGTCTCGATCAGTTTCGGCAGCATGA 966 0.4379 MDSSQGSTIAGFVDKASIQRNESSFDGVPVYVKELIAGGFAGALSKTTVAPLERVKILWQTRTPGFHSLGVYQSLNKILKHEGFQGLYKGNGASVIRIVPYAALHFMTYERYKSWILNTYPVLGTGPFIDLLAGSAAGGTSVADTRGSIKDGMKGVQPAHNGIKGVLTSVYKEGGVRGLYRGAGPTLTGILPYAGLKFYMYEKLKTHVPEEHQKSIMMRLCCGALAGLFGQTLTYPLDVVKRQMQVGSLQNAAHEDARYKNTIDGLRTIVRNQGWRQLFHGVSINYIRIVPSAAISFTTYDMVKSKLGIPPQQKSRSVSAA 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1650 321 Gene3D Mitochondrial carrier domain 29 307 IPR023395 -
Aed4g1650 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 306 IPR018108 -
Aed4g1650 321 Pfam Mitochondrial carrier protein 159 209 IPR018108 -
Aed4g1650 321 Pfam Mitochondrial carrier protein 214 307 IPR018108 -
Aed4g1650 321 Pfam Mitochondrial carrier protein 31 118 IPR018108 -
Aed4g1650 321 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 11 315 - -
Aed4g1650 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 207 IPR018108 -
Aed4g1650 321 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Aed4g1650 321 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Aed4g1650 321 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Aed4g1650 321 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Aed4g1650 321 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
Aed4g1650 321 PANTHER SOLUTE CARRIER FAMILY 25 11 315 - -
Aed4g1650 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 115 IPR018108 -
Aed4g1650 321 SUPERFAMILY Mitochondrial carrier 32 302 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1650 Aed-Chr4 21112218 21116946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1650 26 289 Organic Solute Cotransporters AT4G26180 52.313 1.12e-100 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1650 - - gmx:100784421 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1650 4 21112218 21116946 Aed4g1650 4 21112218 21116946 ECH