Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1643 ATGTCCGACCCAGCCTCCAAACCCAACGGAAACGGCGCAATTAACGGCGCGGCCGCCACTAACGGTAATCCCGGTCCCGTTAAGTCCCAACTCTACAACCCGAACCGACAAGTTTACCGGCCGCAATCGAACTACCACCGTCGCGGCCAACGCTCCAACCGTAACTTCTGTTGCTGCTGCTGCTTCTGGACCATTCTCACCCTCCTCGCGGTGGCGCTCCTAGCCGCCATTGTAGGCGCAGCACTCTACGTACTGTACCGGCCTCACCGCCCCGAATTCTCCGTGACGAACCTCCGCATTGCAAAGATGAACCTCACAACCTCCGCCGACTCGCCCTCGCACCTCACCACGCTCTTCAACCTCACTCTCATCGCGAAGAACCCTAACAACCACCTGATTTTCTTCTACGACGCTTTCTCCGTGACGGTGTTCTCGAACTCCGTCGCCGTGGGGAACGGCTCCGTGACGGCGTTCACCTCGGACAAGAACAACCAGACGAGCCTCCGCGCGGTGCTGTCAGGGTCGCAAGATCTGGACACGGACTCGTTGACTAGCCTGAGATCGGGACTGAAGATGAAGAAAGGGTTCCCCGTTGAGATTCAGATGGACACCAAGGTTAAGATGAAGATGGATTGGCTCAAGAGCAGGAAGGTCGGAATTAGAGTCACTTGCGACGGAATCAGAGGAACCGTTCCCTCCGGCAAAACTCCAGCGGTGGCTTCCGTCGTCGACTCCGAGTGTAAGGTGGATCTTCGAATCAAGATCTGGAAGTTCTCTTTTTAA 783 0.5658 MSDPASKPNGNGAINGAAATNGNPGPVKSQLYNPNRQVYRPQSNYHRRGQRSNRNFCCCCCFWTILTLLAVALLAAIVGAALYVLYRPHRPEFSVTNLRIAKMNLTTSADSPSHLTTLFNLTLIAKNPNNHLIFFYDAFSVTVFSNSVAVGNGSVTAFTSDKNNQTSLRAVLSGSQDLDTDSLTSLRSGLKMKKGFPVEIQMDTKVKMKMDWLKSRKVGIRVTCDGIRGTVPSGKTPAVASVVDSECKVDLRIKIWKFSF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1643 260 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 259 - -
Aed4g1643 260 MobiDBLite consensus disorder prediction 1 31 - -
Aed4g1643 260 PANTHER HARPIN-INDUCED PROTEIN 6 259 - -
Aed4g1643 260 SUPERFAMILY LEA14-like 72 202 - -
Aed4g1643 260 Gene3D - 84 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1643 Aed-Chr4 21071646 21072428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1643 24 253 EF-hand Containing Proteins AT5G21130 30.252 1.72e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1643 - - gmx:100775320 451.44