Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1631 ATGGCAGAAGAAGCACATTATTCATCGGGACCCGATTCCGCTCCCCTGAAGCGCAAGTACGAAGACCAGCCCTCCGGCATCGAGCTCGCCAAGCAGCGTGCTCAGGAAGTCGCCGCTCGCCTCCTCAGCGGCGCTCCTCCTCCGCCCGTCGACGCCAAGCGTCCCAAACCCGAATACGCCGCTCCAACCTCCGGCTTCGATTCTTTCTTCGATTCGAAGCCTCAGTATTCCGCAGCTCCTCCTGTCTCCTACGGTCACCAAGGTACGAGCAAGAAGATTGATATCCCCAATGGTAGGGTTGGTGTCATTATTGGTAAAGGCGGAGAGACCATTAAGTATCTCCAGTTGCAGTCTGGTGCCAAAATTCAAGTCACTCGTGACATGGATGCCGACTCTAATTCTTCCACTAGGATGGTTGAGCTTATGGGCACTCCTGAAGCCATTGCCTCTGCTGAGAAACTCATCAATGAAGTTCTTGCTGAGGCTGAATCTGGCGGTTCTGGCATTATTTCTCGAAGACTGACCGGACAACCTGGGGCTGATGAATTTGTCATGCAAATCCCAAATAATAAGGTTGGCCTTATAATTGGTAAAGGTGGAGAAACAATAAAGAATATGCAGGCTTCGACTGGAGCACGGATTCAGGTGATACCTCTGCATCTTCCCCCGGGTGACACATCAGCTGAAAGAACATTAAAAATTGATGGTACTCCTGAGCAAATTGAGTCTGCAAAGCAGTTGGTTAATCAAGTCATCAGTGGTGAGAATCGTGGTAGAAATCCTGCAATGTCTGGTGGTTATCCTCAGCAAGGTTACCACTCTCGACCACCCTCTAACTGGGCACCACCTGCTCCAATGCAGCAACCTGGTTATGGCTATGTGCAACCCCAGTATAACATGCCTCAGCCACCATATGCAGGCTATCCTCCCCAGCAACCTGGTGGATATTCCACCAATTGGGACCAGTCTACTGCACCACCTAACCAGCAATCTACTCATGCTGGTGGTTATGATTACTATAGTCAACAACCACAAAATCCTGGGGGTCCTGCACCTCCAGCTGATGGCTCTGCATACAATTACAGTCAGCCACCTTCCTCTGGTTATAACCAATCAGGACAGCAGGGTTATGCACAGGACAGCTATAATGCGCAATCACAATCAGGGTATGGGCAGCCACCGACATATGATCAGCAGCAAGGCTATGGCTCAGCTACTGGCTATGGCAATGGGAGTAACCCAGCACAAGAGGGCCACACTGCAAACTATGCAGCACAGGGAGATTCTGCCCAACCGACTACTGCTGTGCAGCAAGGTTATGCTACCAACCAACAGCCCGGTTCAAACACTGCCAACTACCCACCTCAAGGAACTCCTCAGCCAGGTTATGGTGGCAATCAACCACAAGCTGGTTATGGAACCCCTCAACCTCAAAAGCCCAGTGGCAATCCACCTGGTTATGGACAGTCACAGTCTCCTAGTGCAGGAGGAGGCTATGGTCAGTCATCATATCCTGCGCAGCCCCCTCCTTCTGGGTATGCTCAACCAGGGTACGGTTCTGGTTCTCAAACATATGGTGCTCCATATGGAAACAGTTCTTATGGTGCTGGTTATACACAGACCCCAGCATATACCGGTGATGGTAATGGCAATGGGAATGCTCAGGCACCTCAGAGCGCCGTTGCTAAAGCATCGCCCCAGAGTTGA 1707 0.5114 MAEEAHYSSGPDSAPLKRKYEDQPSGIELAKQRAQEVAARLLSGAPPPPVDAKRPKPEYAAPTSGFDSFFDSKPQYSAAPPVSYGHQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADSNSSTRMVELMGTPEAIASAEKLINEVLAEAESGGSGIISRRLTGQPGADEFVMQIPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSAERTLKIDGTPEQIESAKQLVNQVISGENRGRNPAMSGGYPQQGYHSRPPSNWAPPAPMQQPGYGYVQPQYNMPQPPYAGYPPQQPGGYSTNWDQSTAPPNQQSTHAGGYDYYSQQPQNPGGPAPPADGSAYNYSQPPSSGYNQSGQQGYAQDSYNAQSQSGYGQPPTYDQQQGYGSATGYGNGSNPAQEGHTANYAAQGDSAQPTTAVQQGYATNQQPGSNTANYPPQGTPQPGYGGNQPQAGYGTPQPQKPSGNPPGYGQSQSPSAGGGYGQSSYPAQPPPSGYAQPGYGSGSQTYGAPYGNSSYGAGYTQTPAYTGDGNGNGNAQAPQSAVAKASPQS 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1631 568 CDD KH-I 182 248 - -
Aed4g1631 568 Pfam KH domain 184 249 IPR004088 GO:0003723
Aed4g1631 568 Pfam KH domain 92 157 IPR004088 GO:0003723
Aed4g1631 568 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 48 523 - -
Aed4g1631 568 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 85 165 IPR036612 GO:0003723
Aed4g1631 568 Gene3D K Homology domain, type 1 83 177 IPR036612 GO:0003723
Aed4g1631 568 Gene3D K Homology domain, type 1 178 276 IPR036612 GO:0003723
Aed4g1631 568 MobiDBLite consensus disorder prediction 516 568 - -
Aed4g1631 568 CDD KH-I 90 155 - -
Aed4g1631 568 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 48 523 - -
Aed4g1631 568 ProSiteProfiles Type-1 KH domain profile. 88 155 - -
Aed4g1631 568 MobiDBLite consensus disorder prediction 359 508 - -
Aed4g1631 568 SMART kh_6 87 160 IPR004087 GO:0003676
Aed4g1631 568 SMART kh_6 179 253 IPR004087 GO:0003676
Aed4g1631 568 MobiDBLite consensus disorder prediction 41 66 - -
Aed4g1631 568 ProSiteProfiles Type-1 KH domain profile. 180 248 - -
Aed4g1631 568 MobiDBLite consensus disorder prediction 1 27 - -
Aed4g1631 568 MobiDBLite consensus disorder prediction 312 345 - -
Aed4g1631 568 MobiDBLite consensus disorder prediction 255 568 - -
Aed4g1631 568 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 183 255 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1631 Aed-Chr4 21011982 21017282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1631 K13210 - gmx:100797476 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1631 4 21011982 21017282 Aed4g1631 4 21011982 21017282 ECH