Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1618 ATGATTCAAAGAACTGTGTCGACGTTTCCTAATTTAAGGAAATTGCTTCTTCGGGCTACTTCTGCTTCTGCTTCGTCCAAGATCGGAACTTACAAATGCTTTGCTTCTCAGCCCTCCCCTATCCGGAGCCCCAACCCTACTTACAGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGATTGATGCCCACTGATTATATGTACATTACTAAATGTTCTGAGGGTCAGAATTTTGGACAAGGACAACTCAGTCGTTATGGGAATATTGAACTCAGTCCATCAGCTGGGGTCCTAAATTATGGGCAGGGATTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTGTTCCGGCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCGAAAGAATGTGCATGGCATCCCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACAGTTTTGGCTAATAAGCGATGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCTTAGGAACTGGTCCAGTTTTGGGTTTGGCTCCCGCACCTGAATACACATTCCTCATTTTTGCTTCCCCTGTTCGCAATTATTTCAAGGAAGGTTCGGCTCCGCTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTTTTGATGGCGCAAAATAAAGCCAAGAAAAGGGGATTTTCGGATGTGCTGTACCTTGATTCAGCCACCAAGAAAAATCTGGAGGAGGTCTCTTCTTGTAATTTTTGTTGCCAAGCATGTTTTAAACGAGCTGATGAAAATAACTTGCTTCCAATTTCACAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTTATTGAAATTGCTCGTGATCATGGTTATGAGGTAGAAGAGCGTGTTATTGGCGTGGATGAATTGATTGAGGCAGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCCGTAGGGAGTATCACATACCAGGATAAAAGGATAGATTATATAACAGGCTATGGAACCATTTGTCAAGAGCTGAACGATACCATTTCAGGAATTCAAGCGGGTACTATTGAAGATAAGAAGGGATGGATTGTTGAAGTTGATCATTAA 1215 0.4403 MIQRTVSTFPNLRKLLLRATSASASSKIGTYKCFASQPSPIRSPNPTYSDDEYADVDWDSLGFGLMPTDYMYITKCSEGQNFGQGQLSRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGGLLLFRPEENAIRMKTGAERMCMASPSIDHFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIFASPVRNYFKEGSAPLNLYVEENFDRASSRGTGNVKTISNYAPVLMAQNKAKKRGFSDVLYLDSATKKNLEEVSSCNFCCQACFKRADENNLLPISQGKCISTPATNGTILSGITRKSVIEIARDHGYEVEERVIGVDELIEADEVFCTGTAVGVAPVGSITYQDKRIDYITGYGTICQELNDTISGIQAGTIEDKKGWIVEVDH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1618 404 PIRSF BCAT1 38 404 IPR005786 GO:0004084|GO:0009081
Aed4g1618 404 Gene3D - 216 402 IPR043132 -
Aed4g1618 404 CDD BCAT_beta_family 94 390 IPR033939 GO:0004084|GO:0009081
Aed4g1618 404 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 47 399 IPR036038 GO:0003824
Aed4g1618 404 Gene3D - 38 215 IPR043131 -
Aed4g1618 404 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 84 402 IPR005786 GO:0004084|GO:0009081
Aed4g1618 404 Pfam Amino-transferase class IV 107 360 IPR001544 GO:0003824
Aed4g1618 404 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 11 403 - -
Aed4g1618 404 PANTHER AMINO ACID AMINOTRANSFERASE 11 403 IPR005786 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1618 Aed-Chr4 20910760 20915638 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1618 K00826 - gmx:100782644 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1618 4 20910760 20915638 Aed4g1618 4 20910760 20915638 ECH