LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g1615	ATGTTGTCTAGGAAGGCTAGTCATGACTCTCATGGCCAAGACTCTTCTTACTTTCTAGGATGGCAAGAGTACGAGAGGAATCCTTATCACCCCATTCAAAATCTAACCGGAATCATTCAGATGGGACTTGCAGAGAATCAGCTTTCATTTGACCTTCTTAAATCATGGCTTCGAAGAAATCCTGACATAGTGGGAATGAAGAATGATGGAATATCCGTATTTAGAGAGCTTGCTCTTTTCCAGGATTACCATGGCATACCTGCTTTTAAAAATGTACTGGTGGACTTTATGGGAAATATAAGAGGAAATAGAGTAAAATTTGATTCGGAGAAGCTTGTCCTCACAGCCGGCGCAACTCCGGCGAATGAGATTCTGATGTTCTGCCTTGCTGATCCAGGGGAGGCTTTCATTCTTCCCACACCCTATTATCCTGGGTTTGATAGAGATCTGAAATGGAGAACCGGTGTTGAGATTGTTCCAATGCATTGCTCAAGCTCAAATGGCTTCCGAATCACTTCCTCTGCTTTAGAACAAGCCTATCAACAAGCACAAAAACTGAATCTCAACGTCAAAGGGGTCCTAGTAACCAACCCCTCAAACCCACTCGGCATAACCATGACCAAAACGGAGCTCAACCTCCTAGTAGATTTCGCAATTCATAAAAACATTCACATAATAAGCGACGAAATCTACTCGGGTACAGTCTTCGACTCACCCAGATTCGTAAGCATAACTGAAGTTCTGAACGAGAGAATTAGCGTAAAAAACAACAATAGCATCTGGAACCGCATTCACATAGTTTATAGTCTCTCAAAAGACCTTGGCATACCGGGATTTCGCGTGGGAATGATTTACTCCAACAACGAAACGGTTGTGGCCGCTGCGACCAAAATGTCAAGCTTTGGATTGGTGTCTTCACAAACTCAGTATTTGGTGGCGAACTTGCTTAAGGACAAGAAGTTCACTTTCAATTACATGGAAGAGACTCAGAGGAGACTGAAGAGGCGCAAGGAGATGCTGGTGTCTGGCCTCAGAAACGCAGGGATTAGGTGTTTGGAAAGCAATGCTGGGTTGTTCTGCTGGGTTGACATGAGACACTTATTATTAGGCACTAGTTTTGAGGCAGAGAAGGAGCTTTGGATGAAGATTCTTTGCCAAGTTGGGTTGAACATATCTCCTGGCTCTTCTTGCCACTGCTGTGAACCTGGCTGGTTCAGGGTTTGCTTTGCCAACATGTCTGAAGACACGTTAGAAGTTGCAATGCGACGGATCAAGACTTTCACGGACTCAATCCATAGCTAA	1302	0.4416	MLSRKASHDSHGQDSSYFLGWQEYERNPYHPIQNLTGIIQMGLAENQLSFDLLKSWLRRNPDIVGMKNDGISVFRELALFQDYHGIPAFKNVLVDFMGNIRGNRVKFDSEKLVLTAGATPANEILMFCLADPGEAFILPTPYYPGFDRDLKWRTGVEIVPMHCSSSNGFRITSSALEQAYQQAQKLNLNVKGVLVTNPSNPLGITMTKTELNLLVDFAIHKNIHIISDEIYSGTVFDSPRFVSITEVLNERISVKNNNSIWNRIHIVYSLSKDLGIPGFRVGMIYSNNETVVAAATKMSSFGLVSSQTQYLVANLLKDKKFTFNYMEETQRRLKRRKEMLVSGLRNAGIRCLESNAGLFCWVDMRHLLLGTSFEAEKELWMKILCQVGLNISPGSSCHCCEPGWFRVCFANMSEDTLEVAMRRIKTFTDSIHS	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g1615	433	Gene3D	Aspartate Aminotransferase, domain 1	27	423	IPR015422	GO:0003824
	Aed4g1615	433	SUPERFAMILY	PLP-dependent transferases	2	427	IPR015424	-
	Aed4g1615	433	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	187	211	-	-
	Aed4g1615	433	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	111	131	-	-
	Aed4g1615	433	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	295	318	-	-
	Aed4g1615	433	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	223	246	-	-
	Aed4g1615	433	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	133	154	-	-
	Aed4g1615	433	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	263	287	-	-
	Aed4g1615	433	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	41	67	-	-
	Aed4g1615	433	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	74	90	-	-
	Aed4g1615	433	CDD	AAT_like	75	425	-	-
	Aed4g1615	433	Gene3D	-	61	318	IPR015421	GO:0003824
	Aed4g1615	433	PANTHER	BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED	1	431	-	-
	Aed4g1615	433	ProSitePatterns	Aminotransferases class-I pyridoxal-phosphate attachment site.	269	282	IPR004838	GO:0003824\|GO:0009058\|GO:0030170
	Aed4g1615	433	Pfam	Aminotransferase class I and II	39	424	IPR004839	GO:0009058\|GO:0030170
	Aed4g1615	433	PANTHER	1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11	1	431	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g1615	Aed-Chr4	20883605	20888001	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g1615	K01762		-	gmx:100803507	792.341

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g1615	4	20883605	20888001	Aed4g1615	4	20883605	20888001	ECH