Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1601 ATGTCATGGCTGGCTCGTTCCTTCACAGACTCTCTCCGACTCGATGGCGACGAAAACGACATCGTACTGGATCCACCTTCCACGTCATCGAGGGACCCCCGGCAACAGCTACACGAGCCACGAGAAAATGCATTCGGATCAGAAGTTGAAGCTGAAGAAGACGCAGACACGCAAGGGCGTGGTGGAGTCAAAGAGGACCTCGACGAAATCAAGCAAACCCTAACTCGTCAATTTTGGGGAATGGCTTCGTTCCTCGCTCCACCGCCATCGGATTCTCATTCTCAATCTCAATCTCAATCCGATCCCTCTTCCTTCATTTCCGATCAATCCAATCATCGCGCTGTTTCTCCCAACGAAGAGCCGCCGCAGTTGGATGAGGCTGCGATTTCCAATCACTCTATTTCGGTTTCTGTGGGATCCGATTCGGAAGGTGATTGCGGTCTCGAACAGCGTGCGGTTGGAATTACCGAAGAGGTGTTAGCCTTCGCGATGAACATTGCTATGCATCCCGAGACGTGGTTGGATTTTCCTATTGAAGAGGAAGACGACACCGACGATTTTGACGTGTCTGATGCACAACAAGAGCATGCTGCGGTTGTTGAAAGATTGACTCCTAGATTAGCTGCGCTCAGAATTGAACTGTGCCCTTGTCATATGAGTGAAAGTTACTTCTGGAAGGTGTATTTTGTTCTTTTGCATTCAAGGCTTAATAAGGAAGATGCAGGGATTTTGTCTACACCCCAGGTCATGGCAGCAAGGGCAATGTGGATGCAGGAATTGCATAAAAAAACAAAGCCTGAATTTGAAATTTTTGGAATAAGTGCTTCCTACTCAAGAGACAATGCACAGCACGATGATTTTACTCCCAACTTAGTAGATGACTCTTATTCTGATGACATGCCTAAACAGACATATGGATATAGTAGAACAACCTCTTTGTCCATGATAGCAGATCGTGAGACTGATAAGCACATGGTTGAAAGTTCTGGAATGCATTTCACTGATAAGTCTGTTATCGAGGAAAATCCAATTATTAAAACTGAAAACAAGGATCTAAAATGTGGTCGACCCTCTCAAATTTTCATTCAGGATTATGATGATGATGATGATGATGAATGGCCAGAGGAAGATTCTGATTTAGGGGGATATGGTGGAACAACTCACCTCATGGTGAATGAAGAAGACATATCTTTCAGCGATCTTGAGGATGATGATTATGGCATTAAACCCATTAGTTCCAGTATAGATTCGAAGGTGGTATGA 1263 0.4489 MSWLARSFTDSLRLDGDENDIVLDPPSTSSRDPRQQLHEPRENAFGSEVEAEEDADTQGRGGVKEDLDEIKQTLTRQFWGMASFLAPPPSDSHSQSQSQSDPSSFISDQSNHRAVSPNEEPPQLDEAAISNHSISVSVGSDSEGDCGLEQRAVGITEEVLAFAMNIAMHPETWLDFPIEEEDDTDDFDVSDAQQEHAAVVERLTPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKEDAGILSTPQVMAARAMWMQELHKKTKPEFEIFGISASYSRDNAQHDDFTPNLVDDSYSDDMPKQTYGYSRTTSLSMIADRETDKHMVESSGMHFTDKSVIEENPIIKTENKDLKCGRPSQIFIQDYDDDDDDEWPEEDSDLGGYGGTTHLMVNEEDISFSDLEDDDYGIKPISSSIDSKVV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1601 420 MobiDBLite consensus disorder prediction 83 123 - -
Aed4g1601 420 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 418 - -
Aed4g1601 420 MobiDBLite consensus disorder prediction 1 69 - -
Aed4g1601 420 SUPERFAMILY BSD domain-like 154 240 IPR035925 -
Aed4g1601 420 MobiDBLite consensus disorder prediction 88 117 - -
Aed4g1601 420 Gene3D BSD domain 146 243 IPR035925 -
Aed4g1601 420 MobiDBLite consensus disorder prediction 363 387 - -
Aed4g1601 420 MobiDBLite consensus disorder prediction 34 69 - -
Aed4g1601 420 Pfam BSD domain 184 240 IPR005607 -
Aed4g1601 420 MobiDBLite consensus disorder prediction 364 378 - -
Aed4g1601 420 ProSiteProfiles BSD domain profile. 184 236 IPR005607 -
Aed4g1601 420 MobiDBLite consensus disorder prediction 401 420 - -
Aed4g1601 420 SMART wurzfinal6 184 236 IPR005607 -
Aed4g1601 420 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1601 Aed-Chr4 20758154 20761702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1601 154 236 EF-hand Containing Proteins AT1G69030 29.474 6.05e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1601 - - gmx:100794286 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1601 4 20758154 20761702 Aed4g1601 4 20758154 20761702 ECH